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Nfkbia Gene Detail
 Symbol
Name
ID
Nfkbia
nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
MGI:104741


Nomenclature History
Synonyms I(Kappa)B(alpha), I-kappaBalpha, IkappaBalpha, Nfkbi
Genetic Map
Chromosome 12
cytoband C1-C3
 
Mapping data( 4)
Sequence Map
Chr12:56590831-56593570 bp, - strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; pig, domestic; rat    (Mammalian Orthology)
Protein SuperFamily: NF-kappaB inhibitor
TreeFam: TF320166
Sequences
Representative Sequences Length Strain/Species Flank
genomic 18035 NCBI Gene Model | MGI Sequence Detail 2740 C57BL/6J ± Kb
transcript NM_010907 RefSeq | MGI Sequence Detail 1592 C57BL/6
polypeptide Q9Z1E3 UniProt | EBI | MGI Sequence Detail 314 Not Applicable
For the selected sequences
All sequences(24)
Alleles
and
phenotypes
All alleles(7) : Targeted, knock-out(3) Targeted, other(3) Gene trapped(1)
Mice homozygous for disruptions in this gene die at about 1 week of age experiencing abnormalities in the immune system.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (1)  
Polymorphisms SNPs within 2kb(16 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (16 annotations)
Process lipopolysaccharide-mediated signaling pathway, negative regulation of myeloid cell differentiation...
Component cytoplasm, cytosol...
Function NF-kappaB binding
External Resources: FuncBase
Expression Literature Summary: (14 records)
Data Summary: Assays (4)    Results (57)    Tissues (47)    Images (4)
Theiler Stages: 2,3,4,5,17,18,21,26,28
  Assay Type Assays   Results
      Western blot 1   9
      RT-PCR 1   15
      RNA in situ 2   33
cDNA source data(114)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(118) Genomic(3) cDNA(114) Primer pair(1) Antibodies(1)
Microarray probesets(5)
Other database
links
Ensembl Gene Model ENSMUSG00000021025
DoTS DT.102557390, DT.492502
Consensus CDS Project CCDS25918.1
UniGene 170515
DFCI TC1579174, TC1628885, TC1714168
NIA Mouse Gene Index U033960
Entrez Gene 18035
International Mouse Knockout Project Status Nfkbia
Protein
domains
InterPro ID Description
IPR002110 Ankyrin repeat
IPR015681 Nuclear Factor kappaB inhibitor
IPR020683 Ankyrin repeat-containing domain
Graphical View of Protein Domain Structure
References
(Earliest) J:2281 Kawaichi M et al., "Genomic organization of mouse J kappa recombination signal binding protein (RBP-J kappa) gene." J Biol Chem 1992 Feb 25;267(6):4016-22
(Latest) J:147968 Liu M et al., "Nuclear factor-kappaB enhances ErbB2-induced mammary tumorigenesis and neoangiogenesis in vivo." Am J Pathol 2009 May;174(5):1910-20
All references(82)
Other
accession IDs
MGD-MRK-12830, MGD-MRK-28032, MGI:2144835

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory