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Symbol
Name
ID
Location 		H2-Ea
histocompatibility 2, class II antigen E alpha
MGI:95900
Chr 17 (17.98 cM)
42 polymorphisms
Reference Probe Endonuclease Allele Fragments Strains
J:6885 probe 7 EcoRI b 8.6, 3kb B10.A-H2i3/(3R), C3H
c 8.2, 3kb A.SW-H2s/Sn, B10.M-H2ap1/(11R), B10.Q-H2q/SgJ, BALB/c, C57BL/6
J:6885 probe 7 HpaI b 18, 4.4kb B10.A-H2i3/(3R), C3H
c 9.8, 4.4kb A.SW-H2s/Sn, BALB/c, C57BL/6
J:6885 probe 9 HindIII b 18kb BALB/c
c 14kb A, C3H, C57BL/6
J:7253 probe 7 HindIII a 9.0kb C3.tw12, STOCK tK115, STOCK tK120, STOCK tK130, STOCK tS510, STOCK tS735
b 8.1kb STOCK tK100, STOCK tw32
c 8.4kb C3H
J:7675 probe 7 HindIII a 9.0kb C3H-T/tw12
b 8.1kb C3.t12, STOCK tw32
J:7675 probe 7 PstI a 2.7kb C3.t12, STOCK tw32
b 3.0kb C3.tw5
J:8530 probe 7 DraI a 7.2kb B10.K-H2k, B10.RSB5, B10.RSB6, B10.RSB8, B10.RSB11, B10.RSB12, B10.RSB14, B10.RSB15, B10.S-H2t4/(9R)/J, B10.TL-H2r1
b 4.4kb B10.F-H2pb1/(13R)J, B10.P-H2p, B10.RPD1, B10.RPD2
J:8530 probe 7 PstI a 6.2, 2.7kb B10.F-H2pb1/(13R)J, B10.P-H2p
b 6.2, 3.3kb B10.RSB6, B10.RSB8, B10.RSB11, B10.RSB12, B10.RSB15
c 5.8, 3.3kb B10.K-H2k, B10.RSB5, B10.RSB14, B10.S-H2t4/(9R)/J, B10.TL-H2r1
d 5.8, 2.7kb B10.RPD1, B10.RPD2
J:9377 E-alpha-probe TaqI l 3.3kb LT/Sv, LT/Sv.T
t 2.6kb C3.t0, C3.tw5, C3.tw73, STOCK tw32
J:15532 probe 7 BamHI a 6.6kb A.SW-H2s/Sn, B10.DRB62, B10.KPA44, B10.STA10, B10.STA62, BALB/c, C3H, C57BL/6
b 6.6, 5.8kb B10.CAS2
J:15532 probe 7 EcoRI a 8.2, 3.0kb A.SW-H2s/Sn, B10.DRB62, B10.KPA44, B10.STA62, BALB/c, C57BL/6
b 8.6, 3.0kb C3H
c 7.5, 3.0kb B10.STA10
d 7.8, 3.0kb B10.CAS2
J:15532 probe 7 HindIII a 9.0kb A.SW-H2s/Sn, B10.KPA44, B10.STA10, B10.STA62, BALB/c, C3H, C57BL/6
b 8.0kb B10.CAS2
c 8.6kb B10.DRB62
J:15532 probe 7 KpnI a 8.8, 4.2kb B10.DRB62, B10.KPA44, B10.STA10, B10.STA62, BALB/c, C3H
b 8.8, 3.5kb A.SW-H2s/Sn, B10.CAS2, C57BL/6
J:15532 probe 8 BamHI a 16kb AKR, B10.KPA44, B10.STA10, B10.STA62, BALB/c
b 8kb A.SW-H2s/Sn, B10.CAS2, B10.DRB62, C57BL/10
J:15532 probe 8 EcoRI a 22.0kb AKR, B10.DRB62, B10.KPA44, B10.STA62, BALB/c
b 19.5kb A.SW-H2s/Sn, B10.CAS2, B10.STA10, C57BL/10
J:15532 probe 9 EcoRI a 12.3, 7.3kb A.SW-H2s/Sn, AKR, B10.DRB62, B10.STA10, BALB/c, C57BL/10
b 17.2, 12.3kb B10.CAS2, B10.KPA44, B10.STA62
J:15532 probe 9 HindIII a 14.8kb A.SW-H2s/Sn, AKR, B10.CAS2, B10.DRB62, B10.KPA44, B10.STA10, B10.STA62, C57BL/10
b 18.0kb BALB/c
J:15532 probe 10 BamHI a 8kb A.SW-H2s/Sn, B10.CAS2, B10.STA10, B10.STA62, BALB/c, C3H, C57BL/10
b 5kb B10.DRB62, B10.KPA44
J:15532 probe 10 KpnI a 8kb A.SW-H2s/Sn, B10.CAS2, B10.STA10, B10.STA62, BALB/c, C3H, C57BL/10
b 15kb B10.DRB62, B10.KPA44
J:20297 probe 7 HapI a 18, 4.4kb B10.K-H2k, B10.RSB5, B10.RSB6, B10.RSB8, B10.RSB11, B10.RSB12, B10.RSB14, B10.RSB15, B10.S-H2t4/(9R)/J, B10.TL-H2r1
b 9.8, 4.4kb B10.F-H2pb1/(13R)J, B10.P-H2p
J:20297 probe 7 HpaI a 18, 4.4kb B10.K-H2k
b 9.8, 4.4kb B10.P-H2p, B10.RPD1, B10.RPD2
J:20297 probe 7 RsaI a 2.0, 1.7, 1.0kb B10.K-H2k, B10.RPD1, B10.RPD2, B10.RSB5, B10.RSB14, B10.S-H2t4/(9R)/J, B10.TL-H2r1
b 2.8, 1.7, 1.0kb B10.F-H2pb1/(13R)J, B10.P-H2p, B10.RSB6, B10.RSB8, B10.RSB11, B10.RSB12, B10.RSB15, B10.S-H2t4/(9R)/J, B10.TL-H2r1
J:20297 probe 7 SacI a 20, 1.7kb B10.K-H2k
b 15, 1.7kb B10.P-H2p, B10.RPD1, B10.RPD2
J:20297 probe 7 SacI a ~20, ~1.7kb B10.K-H2k, B10.RSB5, B10.RSB6, B10.RSB8, B10.RSB11, B10.RSB12, B10.RSB14, B10.RSB15, B10.S-H2t4/(9R)/J, B10.TL-H2r1
b ~15, ~1.7kb B10.F-H2pb1/(13R)J, B10.P-H2p
J:20596 probe 4 BamHI b 7.4, 7.0kb C57BL/6, CTS, ILI, NOD
c 7.4kb BALB/c, NON
J:20596 probe 4 EcoRI b 8.4, 3.0kb C57BL/6, CTS, ILI, NOD
c 9.6, 3.0kb BALB/c, NON
J:20596 probe 4 HindIII b 7.2kb C57BL/6, CTS, ILI, NOD
c 8.1kb BALB/c, NON
J:20596 probe 4 KpnI b 8.6, 3.0kb C57BL/6, CTS, ILI, NOD
c 8.6, 3.7kb BALB/c, NON
J:20596 probe 5 BamHI b 5.6kb C57BL/6, CTS, ILI, NOD
c 6.2kb BALB/c, NON
J:20596 probe 5 EcoRI b 7.6kb C57BL/6, CTS, ILI, NOD
c 8.4kb BALB/c, NON
J:20596 probe 5 HindIII b 8.6kb C57BL/6, CTS, ILI, NOD
c 9.0kb BALB/c, NON
J:20596 probe 5 KpnI b 3.2kb C57BL/6, CTS, ILI, NOD
c 4.0kb BALB/c, NON
J:20596 probe 6 KpnI b absent C57BL/6, CTS, ILI, NOD
c 4.0kb BALB/c, NON
J:29570 E-alpha-probe BamHI b not given C57BL/6
c not given BALB/c
n not given NOD
J:29570 E-alpha-probe PvuII b ~5.5kb C57BL/6
c ~5.8kb BALB/c
n ~5.6kb NOD
J:29719 H2-Ea genomic3 PstI b 5.4kb B10.A-H2a, C3H
c 4.3kb BALB/c
J:29719 probeI BamHI b ~6.5kb C57BL/10
d ~5.7, ~10.0kb B10.D2-H2d
J:29719 probeI KpnI b ~1.9kb C57BL/10
d ~2.8kb B10.D2-H2d
J:29719 probeI PvuII b 5.1, ~3.1kb C57BL/10
d 5.8, ~3.5kb B10.A-H2h4/(4R), B10.D2-H2d
J:29719 probeI SacI b 4.2kb C57BL/10
d 3.0kb B10.D2-H2d
J:29719 probeI SalI b ~3.1kb C57BL/10
d ~3.8kb B10.D2-H2d
J:29719 probeII KpnI b absent C57BL/10
d ~3.8kb B10.D2-H2d
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory