GO Annotations Graph

• Symbol: Smarca5
• Name: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
• ID: MGI:1935129

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Wed Mar 2 12:11:24 2016.

Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0005524	ATP binding	ISO	J:164563
Molecular Function	GO:0016887	ATPase activity	ISO	J:164563
Molecular Function	GO:0003677	DNA binding	ISO	J:164563
Molecular Function	GO:0004386	helicase activity	IEA	J:60000
Molecular Function	GO:0042393	contributes_to histone binding	ISO	J:164563
Molecular Function	GO:0016787	hydrolase activity	IEA	J:60000
Molecular Function	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEA	J:72247
Molecular Function	GO:0003676	nucleic acid binding	IEA	J:72247
Molecular Function	GO:0031491	nucleosome binding	IEA	J:72247
Molecular Function	GO:0000166	nucleotide binding	IEA	J:60000
Molecular Function	GO:0005515	protein binding	IPI	J:76488
Molecular Function	GO:0005515	protein binding	IPI	J:143888
Molecular Function	GO:0005515	protein binding	IPI	J:108784
Molecular Function	GO:0005515	protein binding	IPI	J:100129
Cellular Component	GO:0005677	chromatin silencing complex	IDA	J:100129
Cellular Component	GO:0000793	condensed chromosome	ISO	J:164563
Cellular Component	GO:0031010	ISWI-type complex	IPI	J:197015
Cellular Component	GO:0043596	colocalizes_with nuclear replication fork	ISO	J:164563
Cellular Component	GO:0005730	nucleolus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IDA	J:111226
Cellular Component	GO:0005634	nucleus	IDA	J:76488
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0016589	NURF complex	ISO	J:164563
Cellular Component	GO:0031213	RSF complex	ISO	J:164563
Biological Process	GO:0043044	ATP-dependent chromatin remodeling	ISO	J:164563
Biological Process	GO:0006333	chromatin assembly or disassembly	IDA	J:76488
Biological Process	GO:0016568	chromatin modification	IEA	J:60000
Biological Process	GO:0006338	chromatin remodeling	ISO	J:164563
Biological Process	GO:0006338	chromatin remodeling	IDA	J:76488
Biological Process	GO:0006338	chromatin remodeling	IGI	J:71381
Biological Process	GO:0000183	chromatin silencing at rDNA	IDA	J:100129
Biological Process	GO:0006352	DNA-templated transcription, initiation	ISO	J:164563
Biological Process	GO:0006302	double-strand break repair	IMP	J:149990
Biological Process	GO:0009790	embryo development	IMP	J:111226
Biological Process	GO:0006334	nucleosome assembly	ISO	J:164563
Biological Process	GO:0016584	nucleosome positioning	ISO	J:164563
Biological Process	GO:0045893	positive regulation of transcription, DNA-templated	IMP	J:111226
Biological Process	GO:0045893	positive regulation of transcription, DNA-templated	TAS	J:76488

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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