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GO Annotations Graph
Symbol
Name
ID
Sfpq
splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
MGI:1918764

GO annotations  (Text View)    (Tabular View)

A table of the annotations represented in this image is provided below.
CategoryGO IDClassification TermEvidenceReference
Molecular FunctionGO:0003682chromatin bindingIDAJ:222150
Molecular FunctionGO:0001047core promoter bindingIDAJ:189236
Molecular FunctionGO:0003677DNA bindingIEAJ:60000
Molecular FunctionGO:0042826histone deacetylase bindingISOJ:164563
Molecular FunctionGO:0003676nucleic acid bindingIEAJ:72247
Molecular FunctionGO:0000166nucleotide bindingIEAJ:72247
Molecular FunctionGO:0044822poly(A) RNA bindingISOJ:164563
Molecular FunctionGO:0005515protein bindingIPIJ:173532
Molecular FunctionGO:0005515protein bindingIPIJ:199302
Molecular FunctionGO:0005515protein bindingIPIJ:144189
Molecular FunctionGO:0005515protein bindingIPIJ:173728
Molecular FunctionGO:0005515protein bindingIPIJ:193640
Molecular FunctionGO:0005515protein bindingIPIJ:173816
Molecular FunctionGO:0005515protein bindingIPIJ:137945
Molecular FunctionGO:0005515protein bindingIPIJ:189236
Molecular FunctionGO:0003723RNA bindingIEAJ:60000
Molecular FunctionGO:0000980RNA polymerase II distal enhancer sequence-specific DNA bindingIDAJ:222150
Molecular FunctionGO:0044212transcription regulatory region DNA bindingISOJ:164563
Molecular FunctionGO:0000976transcription regulatory region sequence-specific DNA bindingIDAJ:173532
Cellular ComponentGO:0000785chromatinISOJ:164563
Cellular ComponentGO:0005737cytoplasmIEAJ:60000
Cellular ComponentGO:0016363nuclear matrixISOJ:164563
Cellular ComponentGO:0005654nucleoplasmISOJ:164563
Cellular ComponentGO:0005634nucleusISOJ:164563
Cellular ComponentGO:0042382paraspecklesISOJ:164563
Cellular ComponentGO:0042382paraspecklesIDAJ:171281
Cellular ComponentGO:0090575RNA polymerase II transcription factor complexIDAJ:222150
Biological ProcessGO:0000380alternative mRNA splicing, via spliceosomeISOJ:164563
Biological ProcessGO:0000380alternative mRNA splicing, via spliceosomeIBAJ:161428
Biological ProcessGO:0006974cellular response to DNA damage stimulusIMPJ:173816
Biological ProcessGO:0051276chromosome organizationIMPJ:173816
Biological ProcessGO:0006281DNA repairIEAJ:60000
Biological ProcessGO:0000724double-strand break repair via homologous recombinationISOJ:173816
Biological ProcessGO:0070932histone H3 deacetylationIMPJ:173532
Biological ProcessGO:0006397mRNA processingIEAJ:60000
Biological ProcessGO:0042754negative regulation of circadian rhythmIMPJ:173532
Biological ProcessGO:0000122negative regulation of transcription from RNA polymerase II promoterISOJ:164563
Biological ProcessGO:0045892negative regulation of transcription, DNA-templatedIMPJ:173532
Biological ProcessGO:0045892negative regulation of transcription, DNA-templatedIDAJ:189236
Biological ProcessGO:1902177positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathwayISOJ:164563
Biological ProcessGO:0045876positive regulation of sister chromatid cohesionIMPJ:173816
Biological ProcessGO:0051726regulation of cell cycleIMPJ:173816
Biological ProcessGO:0042752regulation of circadian rhythmIMPJ:189236
Biological ProcessGO:0006355regulation of transcription, DNA-templatedIEAJ:60000
Biological ProcessGO:0048511rhythmic processIEAJ:60000
Biological ProcessGO:0008380RNA splicingIEAJ:60000
Biological ProcessGO:0006351transcription, DNA-templatedIEAJ:60000


Gene Ontology Evidence Code Abbreviations:

Experimental:
EXP
Inferred from experiment
HMP
Inferred from high throughput mutant phenotype
HGI
Inferred from high throughput genetic interaction
HDA
Inferred from high throughput direct assay
HEP
Inferred from high throughput expression pattern
IDA
Inferred from direct assay
IEP
Inferred from expression pattern
IGI
Inferred from genetic interaction
IMP
Inferred from mutant phenotype
IPI
Inferred from physical interaction
Homology:
IAS
Inferred from ancestral sequence
IBA
Inferred from biological aspect of ancestor
IBD
Inferred from biological aspect of descendant
IKR
Inferred from key residues
IMR
Inferred from missing residues
IRD
Inferred from rapid divergence
ISA
Inferred from sequence alignment
ISM
Inferred from sequence model
ISO
Inferred from sequence orthology
ISS
Inferred from sequence or structural similarity
Automated:
IEA
Inferred from electronic annotation
RCA
Reviewed computational analysis
Other:
IC
Inferred by curator
NAS
Non-traceable author statement
ND
No biological data available
TAS
Traceable author statement


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
03/24/2020
MGI 6.15
The Jackson Laboratory