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Hnrnpk
Gene Detail
Symbol

Name
ID
Hnrnpk
heterogeneous nuclear ribonucleoprotein K
MGI:99894
Synonyms
hnRNPK, Hnrpk, KBBP
Feature Type
protein coding gene
Genetic Map
Chromosome 13
31.04 cM, cytoband B2
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr13:58391142-58403343 bp, - strand
From VEGA annotation of GRCm38

  12202 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:81909  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

HCOP human homology predictions: HNRNPK
Gene Tree: Hnrnpk

Human
homologs
HNRNPK, heterogeneous nuclear ribonucleoprotein K
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 3190
neXtProt AC: NX_P61978

Human Synonyms: CSBP, HNRPK, TUNP

Human Chr (Location): 9q21.32-q21.33; chr9:83968083-83980654 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(36) : Gene trapped(35) Targeted(1)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Hnrnpk interacts with 249 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (4 records)
Data Summary: Results (43)    Tissues (35)    Images (4)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 20
Northern blot 21
RT-PCR 2
cDNA source data(22)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase hnrnpk ; ZFIN hnrnpk    NEW 
Molecular
reagents
All nucleic(25) cDNA(23) Primer pair(1) Other(1)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000035894 (Evidence)
Ensembl Gene Model ENSMUSG00000021546 (Evidence)
Entrez Gene 15387 (Evidence)
DFCI TC1573657, TC1580587, TC1583106, TC1648335
NIA Mouse Gene Index U034849, U060331, U086627, U096168, U106130, U117368
Consensus CDS Project CCDS49283.1
International Mouse Phenotyping Consortium Status Hnrnpk
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000035894 VEGA Gene Model | MGI Sequence Detail 12202 C57BL/6J ±  kb
transcript OTTMUST00000092042 VEGA | MGI Sequence Detail 2970 Not Applicable 
polypeptide OTTMUSP00000050778 VEGA | MGI Sequence Detail 464 Not Applicable 

For the selected sequences
All sequences(158) RefSeq(18) UniProt(17)
Polymorphisms
SNPs within 2kb(22 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR004087 K Homology domain
InterPro IPR009019 K homology domain, prokaryotic type
InterPro IPR004088 K Homology domain, type 1
InterPro IPR012987 ROK, N-terminal
Protein Ontology PR:000008669 heterogeneous nuclear ribonucleoprotein K
References
(Earliest) J:18981 Ostrowski J, et al., Purification, cloning, and expression of a murine phosphoprotein that binds the kappa B motif in vitro identifies it as the homolog of the human heterogeneous nuclear ribonucleoprotein K protein. Description of a novel DNA-dependent phosphorylation pocess. J Biol Chem. 1994 Jul 1;269(26):17626-34
(Latest) J:218269 Lee PT, et al., Morphine drives internal ribosome entry site-mediated hnRNP K translation in neurons through opioid receptor-dependent signaling. Nucleic Acids Res. 2014 Dec 1;42(21):13012-25
All references(53)
Other
accession IDs
MGD-MRK-16689

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory