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Syt3
Gene Detail
 Symbol
Name
ID
Syt3
synaptotagmin III
MGI:99665
Feature Type protein coding gene
Genetic Map
Chromosome 7
28.83 cM
Detailed Genetic Map ± 1 cM


Mapping data(9)
Sequence Map
Chr7:44384102-44400187 bp, + strand
From VEGA annotation of GRCm38

  16086 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:9617  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: B/K protein/synaptotagmin
Gene Tree: Syt3

Human
homologs
Human Homolog SYT3, synaptotagmin III
NCBI Gene ID 84258
neXtProt AC  NX_Q9BQG1
Human Synonyms  SytIII
Human Chr (Location)  19q13.33; chr19:50621977-50658044 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(12) : Gene trapped(7) Targeted(5)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Syt3 interacts with 148 markers (Mir10a, Mir10b, Mir15a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (24 annotations)
Process calcium ion-dependent exocytosis, positive regulation of vesicle fusion, ...
Component cell junction, cytoplasmic vesicle, ...
Function calcium-dependent phospholipid binding, clathrin binding, ...
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (103)    Tissues (94)    Images (25)
Theiler Stages: 22, 23
Assay TypeResults
RNA in situ 103
cDNA source data(10)
External Resources: Allen Institute   GENSAT   GEO   Expression Atlas
Molecular
reagents
All nucleic(14) cDNA(13) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000031834 (Evidence)
Ensembl Gene ModelENSMUSG00000030731 (Evidence)
Entrez Gene20981 (Evidence)
UniGene4824
DFCITC1581817, TC1676040
DoTSDT.101369932, DT.487395
NIA Mouse Gene IndexU008039
Consensus CDS ProjectCCDS21205.1
International Mouse Knockout Project StatusSyt3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000031834 VEGA Gene Model | MGI Sequence Detail 16086 C57BL/6J ±  kb
transcript OTTMUST00000078933 VEGA | MGI Sequence Detail 2494 Not Applicable 
polypeptide OTTMUSP00000042038 VEGA | MGI Sequence Detail 587 Not Applicable 

For the selected sequences
All sequences(50) RefSeq(10) UniProt(4)
Polymorphisms RFLP(3) : SNPs within 2kb(149 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000008 C2 calcium-dependent membrane targeting
InterPro IPR001565 Synaptotagmin
Protein Ontology PR:000015905 synaptotagmin-3
References (Earliest) J:1973 Willison K, The mouse Brachyury gene and mesoderm formation. Trends Genet. 1990 Apr;6(4):104-5
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(54)
Other
accession IDs
MGD-MRK-16450, MGI:2141926

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory