About   Help   FAQ
Mef2c Gene Detail
Summary
  • Symbol
    Mef2c
  • Name
    myocyte enhancer factor 2C
  • Synonyms
    5430401D19Rik, 9930028G15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:99458
    NCBI Gene: 17260
  • Gene Overview
    MyGene.info: MEF2C
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr13:83504034-83667080 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      163047 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 43.68 cM
  • Mapping Data
    5 experiments
Homology
more
  • Human Ortholog
    MEF2C, myocyte enhancer factor 2C
  • Vertebrate Orthologs
    10
  • Human Ortholog
    MEF2C, myocyte enhancer factor 2C
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C5DELq14.3, DEL5q14.3
  • Links
    NCBI Gene ID: 4208
    neXtProt AC: NX_Q06413
    UniProt: Q06413

  • Chr Location
    5q14.3; chr5:88718241-88904105 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 31087
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: MEF2C
  • Gene Tree
Human Diseases
more
  • Diseases
    1 with human MEF2C associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    53 phenotypes from 9 alleles in 13 genetic backgrounds
    17 phenotypes from multigenic genotypes
    56 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for disruptions in this gene have cardiovascular abnormalities and die as embryos.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic OTTMUSG00000044481 VEGA Gene Model | MGI Sequence Detail 163047 C57BL/6J ±  kb
    transcript OTTMUST00000137082 VEGA | MGI Sequence Detail 6277 Not Applicable  
    polypeptide OTTMUSP00000072248 VEGA | MGI Sequence Detail 484 Not Applicable  
    For the selected sequence
    Polymorphisms
    less
    • SNPs within 2kb
      1113 from dbSNP Build 142
    • RFLP
    Protein
    Information
    less
    • UniProt
      24 Sequences
    • PDB
    • InterPro Domains
      IPR022102 Holliday junction regulator protein family C-terminal
      IPR033896 MADS MEF2-like
      IPR002100 Transcription factor, MADS-box
      IPR036879 Transcription factor, MADS-box superfamily
    Molecular
    Reagents
    less
    • All nucleic 54
      cDNA 29
      Primer pair 17
      Other 8

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGD-MRK-16227, MGI:1918600, MGI:2145387, MGI:2443757
    References
    more
    • Summaries
      All 309
      Developmental Gene Expression 158
      Gene Ontology 59
      Phenotypes 56
    • Earliest
      J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
    • Latest
      J:264388 Mifflin JJ, et al., Intercalated cushion cells within the cardiac outflow tract are derived from the myocardial troponin T type 2 (Tnnt2) Cre lineage. Dev Dyn. 2018 Jun 19;

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
    Warranty Disclaimer & Copyright Notice
    Send questions and comments to User Support.
    last database update
    09/11/2018
    MGI 6.12
    The Jackson Laboratory