Rab11b
Gene Detail

Symbol Name ID

Rab11b RAB11B, member RAS oncogene family MGI:99425

Synonyms

A730055L17Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 17

17.98 cM
Detailed Genetic Map ± 1 cM


Mapping data(6)

Sequence Map

Chr17:33745950-33760530 bp, - strand From VEGA annotation of GRCm38   14581 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:68691  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 2 zebrafish

Protein SuperFamily: Ras-related protein Rab
Gene Tree: Rab11b

Human homologs

Human Homolog		RAB11B, RAB11B, member RAS oncogene family
NCBI Gene ID		9230
neXtProt AC		NX_Q15907
Human Synonyms		H-YPT3
Human Chr (Location)		19p13.2; chr19:8455205-8469318 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(14) : Targeted(2) Gene trapped(12)

Gene Ontology (GO) classifications

All GO classifications: (19 annotations)

Process	cell cycle, GTP catabolic process, ...
Component	cytoplasm, cytoplasmic membrane-bounded vesicle, ...
Function	GDP binding, GTPase activity, ...

External Resources: FuncBase

Expression

Literature Summary: (4 records)
Data Summary: Results (20)    Tissues (11)   
Theiler Stages: 9, 16, 19, 28

Assay Type	Results
RNA in situ	2
RT-PCR	18

cDNA source data(192)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(198) Genomic(4) cDNA(192) Primer pair(2)
Microarray probesets(7)

Other database links

VEGA Gene Model	OTTMUSG00000037204 (Evidence)
Ensembl Gene Model	ENSMUSG00000077450 (Evidence)
Entrez Gene	19326 (Evidence)
UniGene	387587
DFCI	TC1573303, TC1601903, TC1615736, TC1631509, TC1696613
DoTS	DT.527118, DT.55101097, DT.91555993, DT.99869606
NIA Mouse Gene Index	U037688, U037689, U352986
Consensus CDS Project	CCDS28628.1
International Mouse Knockout Project Status	Rab11b

Sequences

Length	Strain/Species
genomic	OTTMUSG00000037204	VEGA Gene Model | MGI Sequence Detail	14581	C57BL/6J
transcript	OTTMUST00000095924	VEGA | MGI Sequence Detail	2643	Not Applicable
polypeptide	OTTMUSP00000053555	VEGA | MGI Sequence Detail	218	Not Applicable

All sequences(86) RefSeq(2) UniProt(6)

Polymorphisms

SNPs(102 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR001806	Small GTPase superfamily
InterPro	IPR003579	Small GTPase superfamily, Rab type
InterPro	IPR005225	Small GTP-binding protein domain
Protein Ontology	PR:000013580	ras-related protein Rab-11B

References

(Earliest) J:19871 Lai F, et al., Molecular analysis of mouse Rab11b: a new type of mammalian YPT/Rab protein. Genomics. 1994 Aug;22(3):610-6
(Latest) J:189966 Sokolowski S, et al., The large conductance calcium-activated K(+) channel interacts with the small GTPase Rab11b. Biochem Biophys Res Commun. 2012 Sep 21;426(2):221-5
All references(43)

Other accession IDs

MGD-MRK-16188, MGI:2444458