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Zfp46 Gene Detail
Summary
  • Symbol
    Zfp46
  • Name
    zinc finger protein 46
  • Synonyms
    Zfp-46
  • Feature Type
    protein coding gene
  • IDs
    MGI:99192
    NCBI Gene: 22704
  • Alliance
    genome feature page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:136011994-136021253 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 68.34 cM
  • Mapping Data
    5 experiments
Strain
Comparison
more
  • SNPs within 2kb
    308 from dbSNP Build 142
  • Strain Annotations
    19
  • PCR
    1
  • RFLP
    2
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_99192
 protein coding gene Chr4:136011479-136021253 (+)
129S1/SvImJ ENSMUSG00200019204
 protein coding gene Chr4:129427632-129437171 (+)
A/J ENSMUSG00195038196
 protein coding gene Chr4:130783167-130792457 (+)
AKR/J ENSMUSG00220041314
 protein coding gene Chr4:129777292-129786590 (+)
BALB/cJ ENSMUSG00180044901
 protein coding gene Chr4:128416757-128426065 (+)
C3H/HeJ ENSMUSG00175038947
 protein coding gene Chr4:129436525-129445825 (+)
C57BL/6NJ ENSMUSG00215051821
 protein coding gene Chr4:130952119-130961378 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026659
 protein coding gene Chr4:125953396-125962902 (+)
CAST/EiJ ENSTCUG00005043812
 protein coding gene Chr4:130356246-130365496 (+)
CBA/J ENSMUSG00210053395
 protein coding gene Chr4:129060435-129069733 (+)
DBA/2J ENSMUSG00185052260
 protein coding gene Chr4:130590059-130599377 (+)
FVB/NJ ENSMUSG00205037370
 protein coding gene Chr4:128833518-128842834 (+)
JF1/MsJ ENSUMUG00000009694
 protein coding gene Chr4:131284007-131293543 (+)
LP/J ENSMUSG00230039395
 protein coding gene Chr4:134365680-134375694 (+)
NOD/ShiLtJ ENSMUSG00190034162
 protein coding gene Chr4:128822177-128831495 (+)
NZO/HlLtJ ENSMUSG00225026396
 protein coding gene Chr4:140320629-140330648 (+)
PWK/PhJ ENSLUMG00010044648
 protein coding gene Chr4:128273043-128282337 (+)
SPRET/EiJ ENSMSPG00010034133
 protein coding gene Chr4:130343247-130353119 (+)
WSB/EiJ ENSIUOG00005040406
 protein coding gene Chr4:128724836-128734108 (+)



Homology
more
  • Human Ortholog
    ZNF436, zinc finger protein 436
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZNF436, zinc finger protein 436
  • Synonyms
    Zfp46, ZNF
  • Links
    NCBI Gene ID: 80818
    UniProt: Q9C0F3

  • Chr Location
    1p36.12; chr1:23359448-23369836 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    2
  • Targeted
    2
  • Genomic Mutations
    3 involving Zfp46
  • Find Mice (IMSR)
    9 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    668
  • Tissues
    50
  • cDNA Data
    80
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000051351 Ensembl Gene Model | MGI Sequence Detail 9260 C57BL/6J ±  kb
transcript ENSMUST00000069195 Ensembl | MGI Sequence Detail 4639 Not Applicable  
polypeptide ENSMUSP00000070216 Ensembl | MGI Sequence Detail 452 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 81
    cDNA 80
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGD-MRK-15889, MGD-MRK-15944, MGI:2140266
References
more
  • Summaries
    All 43
    Developmental Gene Expression 4
    Gene Ontology 6
    Phenotypes 8
  • Earliest
    J:4069 Brady JP, et al., Cloning and characterization of a novel zinc-finger protein-encoding cDNA from the mouse eye lens. Gene. 1993 Feb 28;124(2):207-14
  • Latest
    J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory