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Uba52 Gene Detail
Summary
  • Symbol
    Uba52
  • Name
    ubiquitin A-52 residue ribosomal protein fusion product 1
  • Synonyms
    D8Ertd21e
  • Feature Type
    protein coding gene
  • IDs
    MGI:98887
    NCBI Gene: 22186
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:70508263-70510417 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 34.15 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    19 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98887
protein coding gene Chr8:70508263-70510801 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033709
protein coding gene Chr8:70776744-70779609 (-)
A/J MGP_AJ_G0033692
protein coding gene Chr8:67905538-67908315 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0033688
protein coding gene Chr8:68122951-68131867 (-)
C3H/HeJ MGP_C3HHeJ_G0033398
protein coding gene Chr8:70478974-70484115 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034205
protein coding gene Chr8:73456179-73458732 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031149
protein coding gene Chr8:62720547-62723458 (-)
CAST/EiJ MGP_CASTEiJ_G0032723
protein coding gene Chr8:69966618-69968133 (-)
CBA/J MGP_CBAJ_G0033376
protein coding gene Chr8:76086990-76093673 (-)
DBA/2J MGP_DBA2J_G0033530
protein coding gene Chr8:67623225-67625770 (-)
FVB/NJ MGP_FVBNJ_G0033471
protein coding gene Chr8:66738505-66741051 (-)
LP/J MGP_LPJ_G0033617
protein coding gene Chr8:70804915-70807547 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033514
protein coding gene Chr8:78763979-78765494 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034223
protein coding gene Chr8:70022186-70025694 (-)
PWK/PhJ MGP_PWKPhJ_G0032431
protein coding gene Chr8:66921214-66923855 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032267
protein coding gene Chr8:68986481-68989034 (-)
WSB/EiJ MGP_WSBEiJ_G0032838
protein coding gene Chr8:70383250-70386708 (-)



Homology
more
  • Human Ortholog
    UBA52, ubiquitin A-52 residue ribosomal protein fusion product 1
  • Vertebrate Orthologs
    3
  • Human Ortholog
    UBA52, ubiquitin A-52 residue ribosomal protein fusion product 1
    Orthology source: HGNC
  • Synonyms
    CEP52, HUBCEP52, L40, RPL40
  • Links
    NCBI Gene ID: 7311
    neXtProt AC: NX_P62987
    UniProt: P62987

  • Chr Location
    19p13.11; chr19:18563766-18577460 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 22186 NCBI Gene Model | MGI Sequence Detail 2155 C57BL/6J ±  kb
transcript NM_001348229 RefSeq | MGI Sequence Detail 799 C57BL/6  
polypeptide P62984 UniProt | EBI | MGI Sequence Detail 128 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 14
    Primer pair 1

    Microarray probesets 9
Other
Accession IDs
less
MGD-MRK-15325, MGI:1098796
References
more
  • Summaries
    All 39
    Developmental Gene Expression 2
    Gene Ontology 5
    Phenotypes 5
  • Earliest
    J:22168 St. John T, et al., Expression cloning of a lymphocyte homing receptor cDNA: ubiquitin is the reactive species. Science. 1986 Feb 21;231(4740):845-50
  • Latest
    J:248713 Suzuki N, et al., A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1. FEBS J. 2016 Jun;283(11):2004-17

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory