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Trf Gene Detail
Summary
  • Symbol
    Trf
  • Name
    transferrin
  • Synonyms
    HP, Tfn
  • Feature Type
    protein coding gene
  • IDs
    MGI:98821
    NCBI Gene: 22041
  • Gene Overview
    MyGene.info: TF
Location & Maps
more
  • Sequence Map
    Chr9:103204001-103230444 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      26444 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 55.03 cM, cytoband F1-F3
  • Mapping Data
    58 experiments
  • Sequence Tag
Homology
more
  • Human Ortholog
    TF, transferrin
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TF, transferrin
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HEL-S-71p, PRO1557, PRO2086, TFQTL1
  • Links
    NCBI Gene ID: 7018
    neXtProt AC: NX_P02787

  • Chr Location
    3q22.1; chr3:133661998-133779006 (+)  GRCh38.p2

Human Diseases
more
  • Diseases
    1 with Trf mouse models; 1 with human TF associations

Human Disease Mouse Models
       Atransferrinemia   OMIM: 209300 View 2 models
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    1 with disease annotations
  • References
    2 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    16 phenotypes from 1 allele in 1 genetic background
    30 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Homozygotes for a spontaneous mutation exhibit refractory iron-deficient, hypochromic, microcytic anemia with iron-loading in the liver, pancreas, heart and brain. Mutants usually die by two weeks of age. Heterozygotes show minor increases in iron stores.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024707 VEGA Gene Model | MGI Sequence Detail 26444 C57BL/6J ±  kb
transcript OTTMUST00000060812 VEGA | MGI Sequence Detail 2339 Not Applicable  
polypeptide OTTMUSP00000029709 VEGA | MGI Sequence Detail 697 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    166 from dbSNP Build 142
  • RFLP
Protein
Information
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Molecular
Reagents
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  • All nucleic 2505
    Genomic 3
    cDNA 2499
    Primer pair 2
    Other 1

    Microarray probesets 2
Other
Accession IDs
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MGD-MRK-10926, MGD-MRK-15224, MGI:2143006, MGI:96221
References
more
  • Summaries
    All 155
    Developmental Gene Expression 25
    Diseases 2
    Gene Ontology 23
    Phenotypes 30
  • Earliest
    J:15013 THOMPSON S, et al., Hereditary differences in serum proteins of normal mice. Proc Soc Exp Biol Med. 1954 Nov;87(2):315-7
  • Latest
    J:221341 Lun MP, et al., Spatially heterogeneous choroid plexus transcriptomes encode positional identity and contribute to regional CSF production. J Neurosci. 2015 Mar 25;35(12):4903-16

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory