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Trgv2 Gene Detail
Summary
  • Symbol
    Trgv2
  • Name
    T cell receptor gamma variable 2
  • Synonyms
    Vgamma2
  • Feature Type
    gene segment
  • IDs
    MGI:98632
    NCBI Gene: 21636
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:19336573-19337026 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 6.89 cM
Strain
Comparison
more
  • SNPs within 2kb
    55 from dbSNP Build 142
  • Strain Annotations
    12
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98632
gene segment Chr13:19336573-19337167 (-)
129S1/SvImJ MGP_129S1SvImJ_G0002515
gene segment Chr13:16485321-16488195 (-)
A/J MGP_AJ_G0002487
gene segment Chr13:16251351-16253829 (-)
AKR/J MGP_AKRJ_G0002474
gene segment Chr13:16452782-16453378 (-)
BALB/cJ MGP_BALBcJ_G0002484
gene segment Chr13:16261362-16266164 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0002608
gene segment Chr13:17144059-17144653 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002206
gene segment Chr13:14618436-14619035 (+)
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0002471
gene segment Chr13:15527592-15528186 (-)
LP/J MGP_LPJ_G0002512
gene segment Chr13:16753604-16754188 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0002440
gene segment Chr13:18160889-18161483 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002604
gene segment Chr13:16258837-16262162 (-)
PWK/PhJ MGP_PWKPhJ_G0002397
gene segment Chr13:15906558-15907124 (+)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 21636 NCBI Gene Model | MGI Sequence Detail 454 C57BL/6J ±  kb
transcript X00697 GenBank | EMBL | DDBJ | MGI Sequence Detail 1286 Not Specified  
polypeptide A2J008 UniProt | EBI | MGI Sequence Detail 116 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less
  • All nucleic 33
    Genomic 4
    cDNA 28
    Other 1

    Microarray probesets 2
Other
Accession IDs
less
MGD-MRK-14924
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:7491 Saito H, et al., Complete primary structure of a heterodimeric T-cell receptor deduced from cDNA sequences. Nature. 1984 Jun 28-Jul 4;309(5971):757-62
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
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last database update
02/11/2020
MGI 6.14
The Jackson Laboratory