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Trgc3 Gene Detail
Summary
  • Symbol
    Trgc3
  • Name
    T cell receptor gamma, constant 3
  • Synonyms
    Gm17356, Tcrg-C3
  • Feature Type
    gene segment
  • IDs
    MGI:98627
    NCBI Gene: 107575
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr13:19445055-19447567 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 6.89 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    12
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98627
gene segment Chr13:19445054-19447698 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0002394
gene segment Chr13:16149231-16167414 (+)
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0002367
gene segment Chr13:16434558-16463384 (+)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0002329
gene segment Chr13:16163140-16165887 (+)
CBA/J MGP_CBAJ_G0002359
gene segment Chr13:17698924-17701550 (-)
DBA/2J MGP_DBA2J_G0002365
gene segment Chr13:15792059-15793938 (-)
FVB/NJ MGP_FVBNJ_G0002377
gene segment Chr13:15429428-15450837 (+)
LP/J MGP_LPJ_G0002417
gene segment Chr13:16664839-16666559 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002345
gene segment Chr13:18065665-18067892 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0002507
gene segment Chr13:16176412-16180858 (+)
PWK/PhJ MGP_PWKPhJ_G0002290
gene segment Chr13:15873343-15875956 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0002359
gene segment Chr13:16153363-16156108 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 107575 NCBI Gene Model | MGI Sequence Detail 2513 C57BL/6J ±  kb
polypeptide L7N479 UniProt | EBI | MGI Sequence Detail 172 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR003597 Immunoglobulin C1-set
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
Molecular
Reagents
less
  • All nucleic 4
    Genomic 3
    cDNA 1
Other
Accession IDs
less
MGD-MRK-14919, MGI:4936990
References
more
  • Summaries
    All 10
    Gene Ontology 1
  • Earliest
    J:7709 Hayday AC, et al., Structure, organization, and somatic rearrangement of T cell gamma genes. Cell. 1985 Feb;40(2):259-69
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/12/2022
MGI 6.17
The Jackson Laboratory