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Trgc2 Gene Detail
Summary
  • Symbol
    Trgc2
  • Name
    T cell receptor gamma, constant 2
  • Synonyms
    Gm16603, Tcrg-C2, Trgc2
  • Feature Type
    gene segment
  • IDs
    MGI:98626
    NCBI Gene: 107574
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr13:19305060-19307551 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 6.89 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    127 from dbSNP Build 142
  • Strain Annotations
    8
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98626
gene segment Chr13:19304649-19307551 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J MGP_AKRJ_G0002380
gene segment Chr13:16422877-16429035 (-)
BALB/cJ MGP_BALBcJ_G0002389
gene segment Chr13:16172494-16180522 (+)
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0002375
gene segment Chr13:15381206-15386915 (+)
LP/J MGP_LPJ_G0002419
gene segment Chr13:16664840-16666968 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002347
gene segment Chr13:18122215-18126704 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002509
gene segment Chr13:16220438-16223390 (-)
PWK/PhJ MGP_PWKPhJ_G0002288
gene segment Chr13:15872861-15875955 (-)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Literature Summary
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 107574 NCBI Gene Model | MGI Sequence Detail 2492 C57BL/6J ±  kb
polypeptide A0A075B5Z2 UniProt | EBI | MGI Sequence Detail 167 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR003597 Immunoglobulin C1-set
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
Molecular
Reagents
less
  • All nucleic 8
    Genomic 2
    cDNA 6
Other
Accession IDs
less
MGD-MRK-14918, MGI:4439527
References
more
  • Summaries
    All 14
    Developmental Gene Expression 1
    Gene Ontology 1
  • Earliest
    J:7709 Hayday AC, et al., Structure, organization, and somatic rearrangement of T cell gamma genes. Cell. 1985 Feb;40(2):259-69
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/20/2020
MGI 6.16
The Jackson Laboratory