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Trbv1 Gene Detail
Summary
  • Symbol
    Trbv1
  • Name
    T cell receptor beta, variable 1
  • Synonyms
    Gm6273
  • Feature Type
    gene segment
  • IDs
    MGI:98594
    NCBI Gene: 621968
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:40891296-40891885 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 18.93 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    15 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98594
gene segment Chr6:40891229-40891885 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002576
gene segment Chr6:39366608-39367264 (+)
A/J MGP_AJ_G0002547
gene segment Chr6:37642068-37642724 (+)
AKR/J MGP_AKRJ_G0002538
gene segment Chr6:38848200-38848856 (+)
BALB/cJ MGP_BALBcJ_G0002533
gene segment Chr6:37863813-37864469 (+)
C3H/HeJ MGP_C3HHeJ_G0002500
gene segment Chr6:38858254-38858910 (+)
C57BL/6NJ MGP_C57BL6NJ_G0002674
gene segment Chr6:40360737-40361393 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002243
gene segment Chr6:35480451-35481107 (+)
CAST/EiJ MGP_CASTEiJ_G0002485
gene segment Chr6:38778736-38779392 (+)
CBA/J MGP_CBAJ_G0002499
gene segment Chr6:41988796-41989452 (+)
DBA/2J MGP_DBA2J_G0002503
gene segment Chr6:37462477-37463133 (+)
FVB/NJ MGP_FVBNJ_G0002531
gene segment Chr6:37226317-37226973 (+)
LP/J MGP_LPJ_G0002582
gene segment Chr6:39382242-39382898 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002506
gene segment Chr6:44213292-44213948 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0002684
gene segment Chr6:38799123-38799779 (+)
PWK/PhJ MGP_PWKPhJ_G0002445
gene segment Chr6:37115246-37115902 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002397
gene segment Chr6:38529034-38529690 (+)
WSB/EiJ MGP_WSBEiJ_G0002501
gene segment Chr6:38752212-38752868 (+)



Homology
less
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 621968 NCBI Gene Model | MGI Sequence Detail 590 C57BL/6J ±  kb
transcript AK138971 GenBank | EMBL | DDBJ | MGI Sequence Detail 975 C57BL/6J  
polypeptide A0A0B4J1G7 UniProt | EBI | MGI Sequence Detail 116 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less
  • All nucleic 10
    Genomic 5
    cDNA 4
    Other 1

    Microarray probesets 1
Other
Accession IDs
less
MGD-MRK-14886, MGI:3779582
References
more
  • Summaries
    All 18
    Developmental Gene Expression 1
    Gene Ontology 1
  • Earliest
    J:7628 Patten P, et al., Structure, expression and divergence of T-cell receptor beta-chain variable regions. Nature. 1984 Nov 1-7;312(5989):40-6
  • Latest
    J:180175 Patel O, et al., Vbeta2 natural killer T cell antigen receptor-mediated recognition of CD1d-glycolipid antigen. Proc Natl Acad Sci U S A. 2011 Nov 22;108(47):19007-12

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory