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Sox14
Gene Detail
 Symbol
Name
ID
Sox14
SRY (sex determining region Y)-box 14
MGI:98362
Feature Type protein coding gene
Genetic Map
Chromosome 9
52.11 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr9:99874106-99876170 bp, - strand
From VEGA annotation of GRCm38

  2065 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:31224  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Sox14

Human
homologs
Human Homolog SOX14, SRY (sex determining region Y)-box 14
NCBI Gene ID 8403
neXtProt AC  NX_O95416
Human Synonyms  SOX28
Human Chr (Location)  3q22-q23; chr3:137764292-137766334 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Sox14 interacts with 149 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (13 annotations)
Process entrainment of circadian clock, regulation of neuron migration, ...
Component nuclear transcription factor complex, nucleus
Function chromatin binding, DNA binding, ...
This is a GO Consortium Reference Genome Project gene.
External Resources: FuncBase
Expression
Literature Summary: (19 records)
Data Summary: Results (143)    Tissues (126)    Images (27)
Theiler Stages: 17, 18, 19, 20, 21, 22, 23, 24, 28
Assay TypeResults
RNA in situ 97
RT-PCR 46
cDNA source data(7)
External Resources: Allen Institute   GENSAT   GEO   Expression Atlas
Molecular
reagents
All nucleic(14) Genomic(2) cDNA(8) Primer pair(2) Other(2)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000044377 (Evidence)
Ensembl Gene ModelENSMUSG00000053747 (Evidence)
Entrez Gene20669 (Evidence)
DFCITC1598050, TC1601158
DoTSDT.101247635, DT.97409560
NIA Mouse Gene IndexU031238
Consensus CDS ProjectCCDS57695.1
International Mouse Knockout Project StatusSox14
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000044377 VEGA Gene Model | MGI Sequence Detail 2065 C57BL/6J ±  kb
transcript OTTMUST00000116820 VEGA | MGI Sequence Detail 2065 Not Applicable 
polypeptide OTTMUSP00000065193 VEGA | MGI Sequence Detail 240 Not Applicable 

For the selected sequences
All sequences(37) RefSeq(2) UniProt(8)
Polymorphisms PCR(1) : SNPs within 2kb(54 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR009071 High mobility group (HMG) box domain
InterPro IPR022097 Transcription factor SOX
Protein Ontology PR:000015422 transcription factor SOX-14
References (Earliest) J:4011 Wright EM, et al., Seven new members of the Sox gene family expressed during mouse development. Nucleic Acids Res. 1993 Feb 11;21(3):744
(Latest) J:202816 Wajapeyee N, et al., Oncogenic RAS directs silencing of tumor suppressor genes through ordered recruitment of transcriptional repressors. Genes Dev. 2013 Oct 15;27(20):2221-6
All references(48)
Other
accession IDs
MGD-MRK-14501

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory