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Snrpd1 Gene Detail
Summary
  • Symbol
    Snrpd1
  • Name
    small nuclear ribonucleoprotein D1
  • Synonyms
    SMD1
  • Feature Type
    protein coding gene
  • IDs
    MGI:98344
    NCBI Gene: 20641
Location & Maps
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  • Sequence Map
    Chr18:10617796-10628230 bp, + strand
  • From NCBI annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      10435 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 5.25 cM
  • Mapping Data
    1 experiment
Homology
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  • Human Ortholog
    SNRPD1, small nuclear ribonucleoprotein D1 polypeptide
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SNRPD1, small nuclear ribonucleoprotein D1 polypeptide
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HsT2456, Sm-D1, SMD1, SNRPD
  • Links
    NCBI Gene ID: 6632
    neXtProt AC: NX_P62314

  • Chr Location
    18q11.2; chr18:21612269-21630247 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 20641 NCBI Gene Model | MGI Sequence Detail 10435 C57BL/6J ±  kb
transcript NM_009226 RefSeq | MGI Sequence Detail 837 C57BL/6  
polypeptide P62315 UniProt | EBI | MGI Sequence Detail 119 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    43 from dbSNP Build 142
  • RFLP
Protein
Information
less
Molecular
Reagents
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  • All nucleic 61
    cDNA 61

    Microarray probesets 3
Other
Accession IDs
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MGD-MRK-14474, MGI:2138740, MGI:2139130
References
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  • Summaries
    All 29
    Gene Ontology 6
    Phenotypes 5
  • Earliest
    J:1159 Mitsuda T, et al., The murine Sm-D autoantigen: multiple genes, genetic polymorphism, evolutionary conservation and lack of intervening sequences in the coding region. J Autoimmun. 1992 Jun;5(3):277-87
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory