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Scp2-ps1 Pseudogene Detail
Summary
  • Symbol
    Scp2-ps1
  • Name
    sterol carrier protein 2, pseudogene 1
  • Feature Type
    pseudogene
  • IDs
    MGI:98255
    NCBI Gene: 20281
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:155514441-155515311 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 80.04 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    10 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98255
pseudogene Chr3:155514422-155515667 (+)
129S1/SvImJ MGP_129S1SvImJ_G0040344
pseudogene Chr3:159569386-159570256 (+)
A/J MGP_AJ_G0040317
pseudogene Chr3:153748834-153749704 (+)
AKR/J MGP_AKRJ_G0040254
pseudogene Chr3:157835299-157837475 (+)
BALB/cJ MGP_BALBcJ_G0040317
pseudogene Chr3:153546718-153547588 (+)
C3H/HeJ MGP_C3HHeJ_G0039946
pseudogene Chr3:158225534-158226404 (+)
C57BL/6NJ MGP_C57BL6NJ_G0040919
pseudogene Chr3:164745415-164746285 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0037330
pseudogene Chr3:148459375-148459871 (+)
CAST/EiJ MGP_CASTEiJ_G0039026
pseudogene Chr3:158360257-158361105 (+)
CBA/J MGP_CBAJ_G0039910
pseudogene Chr3:170666013-170666883 (+)
DBA/2J MGP_DBA2J_G0040118
pseudogene Chr3:152808466-152809336 (+)
FVB/NJ MGP_FVBNJ_G0040073
pseudogene Chr3:150172666-150174554 (+)
LP/J MGP_LPJ_G0040165
pseudogene Chr3:160888246-160891323 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0040068
pseudogene Chr3:179148887-179149757 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0041015
pseudogene Chr3:157493237-157494107 (+)
PWK/PhJ MGP_PWKPhJ_G0038717
pseudogene Chr3:152742077-152742947 (+)
SPRET/EiJ MGP_SPRETEiJ_G0038421
pseudogene Chr3:155687145-155688011 (+)
WSB/EiJ MGP_WSBEiJ_G0039265
pseudogene Chr3:158483210-158484080 (+)



Homology
less
Expression
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000103295 Ensembl Gene Model | MGI Sequence Detail 871 C57BL/6J ±  kb
transcript ENSMUST00000193152 Ensembl | MGI Sequence Detail 499 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    Genomic 4
Other
Accession IDs
less
MGD-MRK-14328
References
more
  • Summaries
    All 6
  • Earliest
    J:3953 Seedorf U, et al., Cloning, expression and sequences of mouse sterol-carrier protein-x-encoding cDNAs and a related pseudogene. Gene. 1993 Jan 30;123(2):165-72
  • Latest
    J:34922 Raabe M, et al., Structure and chromosomal assignment of the murine sterol carrier protein 2 gene (Scp2) and two related pseudogenes by in situ hybridization. Cytogenet Cell Genet. 1996;73(4):279-81

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/21/2020
MGI 6.14
The Jackson Laboratory