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Saa4 Gene Detail
Summary
  • Symbol
    Saa4
  • Name
    serum amyloid A 4
  • Synonyms
    Saa-4, Saa-5
  • Feature Type
    protein coding gene
  • IDs
    MGI:98224
    NCBI Gene: 20211
  • Member of
    Saa cluster
Location & Maps
more
  • Sequence Map
    Chr7:46727998-46732603 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      4606 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 30.53 cM
  • Mapping Data
    8 experiments
Homology
more
  • Human Ortholog
    SAA2-SAA4, SAA2-SAA4 readthrough
  • Vertebrate Orthologs
    6
  • Human Ortholog
    SAA2-SAA4, SAA2-SAA4 readthrough
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 100528017

  • Chr Location
    11p15.1; chr11:18231355-18248674 (-)  GRCh38.p2

  • Human Ortholog
    SAA4, serum amyloid A4, constitutive
    Orthology source: HGNC
  • Synonyms
    CSAA, C-SAA
  • Links
    NCBI Gene ID: 6291
    neXtProt AC: NX_P35542

  • Chr Location
    11p15.1-p14; chr11:18231355-18236837 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Targeted
    2
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000058658 VEGA Gene Model | MGI Sequence Detail 4606 C57BL/6J ±  kb
transcript OTTMUST00000144061 VEGA | MGI Sequence Detail 2094 Not Applicable  
polypeptide OTTMUSP00000075109 VEGA | MGI Sequence Detail 130 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    109 from dbSNP Build 142
  • RFLP
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR000096 Serum amyloid A protein
Molecular
Reagents
less
  • All nucleic 22
    Genomic 5
    cDNA 12
    Other 5

    Microarray probesets 4
Other
Accession IDs
less
MGD-MRK-14276, MGD-MRK-14281
References
more
  • Summaries
    All 30
    Gene Ontology 3
    Phenotypes 3
  • Earliest
    J:30484 Taylor BA, et al., Detailed mapping of serum amyloid A complex (Saa) on Chr 7. Mouse News Lett. 1984;71:31
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/20/2016
MGI 6.05
The Jackson Laboratory