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Rps15
Gene Detail
Symbol

Name
ID
Rps15
ribosomal protein S15
MGI:98117
Synonyms
insulinoma, rat insulinoma gene, rig
Feature Type
protein coding gene
Genetic Map
Chromosome 10
39.72 cM, cytoband C1
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr10:80292453-80294114 bp, + strand
From VEGA annotation of GRCm38

  1662 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:110643  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

HCOP human homology predictions: RPS15
Protein SuperFamily: ribosomal protein, S19p/S19a/S15e/organellar S19 types
Gene Tree: Rps15

Human
homologs
RPS15, ribosomal protein S15
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 6209
neXtProt AC: NX_P62841

Human Synonyms: RIG, S15

Human Chr (Location): 19p13.3; chr19:1438364-1440494 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(33) : Gene trapped(32) Targeted(1)
Incidental mutations (data from APF )
Interactions
Rps15 interacts with 2 markers (Mir493, Mir1952)
Gene Ontology
(GO)
classifications
All GO classifications: (23 annotations)
Process osteoblast differentiation, ribosomal small subunit assembly, ...
Component cytoplasm, cytosolic small ribosomal subunit, ...
Function poly(A) RNA binding, protein binding, ...
This is a GO Consortium Reference Genome Project gene.
External Resources: FuncBase
Expression
Literature Summary: (5 records)
cDNA source data(592)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase rps15    NEW 
Molecular
reagents
All nucleic(593) cDNA(593)
Microarray probesets(6)
Other database
links
VEGA Gene Model OTTMUSG00000000015 (Evidence)
Ensembl Gene Model ENSMUSG00000063457 (Evidence)
Entrez Gene 20054 (Evidence)
UniGene 643
DFCI TC1573894
DoTS DT.101319894, DT.101319903, DT.91590580
NIA Mouse Gene Index U075637, U146033, U158161, U264974
Consensus CDS Project CCDS35978.1
International Mouse Phenotyping Consortium Status Rps15
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000000015 VEGA Gene Model | MGI Sequence Detail 1662 C57BL/6J ±  kb
transcript OTTMUST00000045767 VEGA | MGI Sequence Detail 500 Not Applicable 
polypeptide OTTMUSP00000020607 VEGA | MGI Sequence Detail 145 Not Applicable 

For the selected sequences
All sequences(39) RefSeq(4) UniProt(4)
Polymorphisms
SNPs within 2kb(13 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR005713 Ribosomal protein S19A/S15e
InterPro IPR020934 Ribosomal protein S19 conserved site
InterPro IPR002222 Ribosomal protein S19/S15
InterPro IPR023575 Ribosomal protein S19, superfamily
Protein Ontology PR:000014256 40S ribosomal protein S15
References
(Earliest) J:49826 Sugawara A, et al., Nucleotide sequence determination of mouse, chicken and Xenopus laevis rig cDNAs: the rig-encoded protein is extremely conserved during vertebrate evolution. Biochem Biophys Res Commun. 1990 Feb 14;166(3):1501-7
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(40)
Other
accession IDs
MGD-MRK-14143

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory