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Rpl27 Gene Detail
Summary
  • Symbol
    Rpl27
  • Name
    ribosomal protein L27
  • Feature Type
    protein coding gene
  • IDs
    MGI:98036
    NCBI Gene: 19942
  • Gene Overview
    MyGene.info: RPL27
  • Alliance
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:101442298-101445529 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 65.05 cM, cytoband A1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    58 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98036
protein coding gene Chr11:101442245-101445596 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019202
protein coding gene Chr11:104309832-104313586 (+)
A/J MGP_AJ_G0019170
protein coding gene Chr11:99918866-99927349 (+)
AKR/J MGP_AKRJ_G0019139
protein coding gene Chr11:103028413-103034580 (+)
BALB/cJ MGP_BALBcJ_G0019144
protein coding gene Chr11:100415194-100418622 (+)
C3H/HeJ MGP_C3HHeJ_G0018953
protein coding gene Chr11:103199290-103205988 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019593
protein coding gene Chr11:107582608-107588371 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017219
protein coding gene Chr11:97321836-97324985 (+)
CAST/EiJ MGP_CASTEiJ_G0018507
protein coding gene Chr11:104181857-104187118 (+)
CBA/J MGP_CBAJ_G0018922
protein coding gene Chr11:112012786-112016017 (+)
DBA/2J MGP_DBA2J_G0019034
protein coding gene Chr11:99441691-99444922 (+)
FVB/NJ MGP_FVBNJ_G0019024
protein coding gene Chr11:98988178-98992246 (+)
LP/J MGP_LPJ_G0019103
protein coding gene Chr11:104848715-104852483 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019055
protein coding gene Chr11:111567196-111570951 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019631
protein coding gene Chr11:103360302-103363595 (+)
PWK/PhJ MGP_PWKPhJ_G0018270
protein coding gene Chr11:100508225-100511612 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018062
protein coding gene Chr11:103083672-103086879 (+)
WSB/EiJ MGP_WSBEiJ_G0018556
protein coding gene Chr11:103355610-103358838 (+)



Homology
more
  • Human Ortholog
    RPL27, ribosomal protein L27
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RPL27, ribosomal protein L27
    Orthology source: HomoloGene, HGNC
  • Synonyms
    DBA16, L27
  • Links
    NCBI Gene ID: 6155
    neXtProt AC: NX_P61353
    UniProt: P61353

  • Chr Location
    17q21.31; chr17:42998429-43002959 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000063316 Ensembl Gene Model | MGI Sequence Detail 3232 C57BL/6J ±  kb
transcript ENSMUST00000077856 Ensembl | MGI Sequence Detail 614 Not Applicable  
polypeptide ENSMUSP00000090305 Ensembl | MGI Sequence Detail 136 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 18
    cDNA 15
    Primer pair 3

    Microarray probesets 7
Other
Accession IDs
less
MGD-MRK-14059
References
more
  • Summaries
    All 35
    Developmental Gene Expression 4
    Gene Ontology 4
    Phenotypes 8
  • Earliest
    J:8614 Belhumeur P, et al., Isolation and characterisation of a murine cDNA clone highly homologous to the yeast L29 ribosomal protein gene. Nucleic Acids Res. 1987 Feb 11;15(3):1019-29
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory