Rnu2-10 Gene Detail

Summary

• Symbol
  Rnu2-10
• Name
  U2 small nuclear RNA 10
• Synonyms
  Rnu2

• Feature Type
  snRNA gene
• IDs
  MGI:97976
  NCBI Gene: 19848
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:101549064-101549250 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 65.48 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  32 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_97976	snRNA gene	Chr11:101549064-101549254 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Rnu2-10
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Rnu2-10
• Find Mice (IMSR)
  0 strains or lines available

Subtle gait abnormalities, i.e., walking on the toes of the hind feet and a slight side-to-side sway, progress by approximately 11 weeks of age to a splay-legged, staggering walk with a pronounce side-to-side sway that sometimes causes the animal to loseits balance and fall over.

Expression

• Assay Results
  9
• Tissues
  1
• Literature Summary
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  6
• RefSeq
  1

• Ensembl
  ENSMUSG00000118837 (Evidence)
• NCBI Gene
  19848

Representative Sequences			Length	Strain/Species
genomic	19848	NCBI Gene Model | MGI Sequence Detail	187	C57BL/6J
transcript	NR_004414	RefSeq | MGI Sequence Detail	187	Swiss Webster

Molecular
Reagents

• All nucleic 2

  Primer pair 2

  
  

  Microarray probesets 7

Other
Accession IDs

MGD-MRK-13973, MGI:3054724

References

• Summaries
  All 17

  Developmental Gene Expression 2

  Phenotypes 5
• Earliest
  J:7100 Nojima H, et al., Genes and pseudogenes for mouse U1 and U2 small nuclear RNAs. J Biol Chem. 1983 Jul 10;258(13):8151-5
• Latest
  J:179357 Jia Y, et al., Mutation of a U2 snRNA gene causes global disruption of alternative splicing and neurodegeneration. Cell. 2012 Jan 20;148(1-2):296-308