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Pygl
Gene Detail
Symbol

Name
ID
Pygl
liver glycogen phosphorylase
MGI:97829
Feature Type
protein coding gene
Genetic Map
Chromosome 12
29.01 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr12:70190811-70231488 bp, - strand
From VEGA annotation of GRCm38

  40678 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Protein SuperFamily: glucan phosphorylase
Gene Tree: Pygl
Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Pygl interacts with 43 markers (Mir30c-1, Mir30c-2, Mir128-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (15 annotations)
Process carbohydrate metabolic process, glycogen metabolic process, ...
Function catalytic activity, glycogen phosphorylase activity, ...
This is a GO Consortium Reference Genome Project gene.
External Resources: FuncBase
Expression
Literature Summary: (6 records)
Data Summary: Results (102)    Tissues (97)    Images (8)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 96
RT-PCR 6
cDNA source data(58)
External Resources: Allen Institute   Expression Atlas
Molecular
reagents
All nucleic(61) cDNA(59) Primer pair(2)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000025904 (Evidence)
Ensembl Gene ModelENSMUSG00000021069 (Evidence)
Entrez Gene110095, 102634525
UniGene256926
DFCITC1577070
DoTSDT.530693, DT.97364909
NIA Mouse Gene IndexU034044
EC2.4.1.1
Consensus CDS ProjectCCDS25957.1
International Mouse Knockout Project StatusPygl
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000025904 VEGA Gene Model | MGI Sequence Detail 40678 C57BL/6J ±  kb
transcript OTTMUST00000063841 VEGA | MGI Sequence Detail 2825 Not Applicable 
polypeptide OTTMUSP00000031636 VEGA | MGI Sequence Detail 850 Not Applicable 

For the selected sequences
All sequences(33) UniProt(5)
Polymorphisms
RFLP(5) : SNPs within 2kb(381 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011833 Glycogen/starch/alpha-glucan phosphorylase
InterPro IPR000811 Glycosyl transferase, family 35
Protein Ontology PR:000013521 glycogen phosphorylase, liver form
References
(Earliest) J:9387 Aldrich CJ, et al., Regulation of Qa-1 expression and determinant modification by an H-2D-linked gene, Qdm. Immunogenetics. 1988;28(5):334-44
(Latest) J:193325 Boj SF, et al., Diabetes risk gene and Wnt effector Tcf7l2/TCF4 controls hepatic response to perinatal and adult metabolic demand. Cell. 2012 Dec 21;151(7):1595-607
All references(36)
Other
accession IDs
MGD-MRK-13702

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory