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Prm1
Gene Detail
 Symbol
Name
ID
Prm1
protamine 1
MGI:97765
Synonyms Prm-1
Feature Type protein coding gene
Genetic Map
Chromosome 16
5.87 cM, cytoband cen-C3
Detailed Genetic Map ± 1 cM


Mapping data(63)
Sequence Map
Chr16:10796326-10796886 bp, - strand
From VEGA annotation of GRCm38

  561 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Gene Tree: Prm1
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
 
In chimeras deformed sperm with loosely compacted chromatin are derived from spermatogenic cells with one copy of the mutated allele. No offspring carrying the mutated allele are produced from matings using chimeras.
 
Interactions
Prm1 interacts with 54 markers (Mir19a, Mir26a-1, Mir26a-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (15 annotations)
Process cell differentiation, chromosome condensation, ...
Component chromosome, nucleosome, ...
Function DNA binding
External Resources: FuncBase
Expression
Literature Summary: (12 records)
Data Summary: Results (40)    Tissues (5)   
Theiler Stages: 25, 26, 27, 28
Assay TypeResults
Northern blot 13
RT-PCR 27
cDNA source data(227)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(236) Genomic(3) cDNA(228) Primer pair(3) Other(2)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000025621 (Evidence)
Ensembl Gene ModelENSMUSG00000022501 (Evidence)
Entrez Gene19118 (Evidence)
UniGene42733
DFCITC1572620, TC1737774, TC1751535
DoTSDT.536534, DT.94286341, DT.94286375
NIA Mouse Gene IndexU036786
Consensus CDS ProjectCCDS27956.1
International Mouse Knockout Project StatusPrm1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000025621 VEGA Gene Model | MGI Sequence Detail 561 C57BL/6J ±  kb
transcript OTTMUST00000063029 VEGA | MGI Sequence Detail 469 Not Applicable 
polypeptide OTTMUSP00000031138 VEGA | MGI Sequence Detail 51 Not Applicable 

For the selected sequences
All sequences(30) RefSeq(2) UniProt(3)
Polymorphisms RFLP(16) : SNPs within 2kb(29 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000221 Protamine P1
Protein Ontology PR:000013249 sperm protamine P1
References (Earliest) J:7131 Kleene KC, et al., cDNA clones encoding cytoplasmic poly(A)+ RNAs which first appear at detectable levels in haploid phases of spermatogenesis in the mouse. Dev Biol. 1983 Aug;98(2):455-64
(Latest) J:207933 Mashiko D, et al., Generation of mutant mice by pronuclear injection of circular plasmid expressing Cas9 and single guided RNA. Sci Rep. 2013;3:3355
All references(115)
Other
accession IDs
MGD-MRK-13616, MGD-MRK-13618

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory