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Pgk1-rs7 Pseudogene Detail
Summary
  • Symbol
    Pgk1-rs7
  • Name
    phosphoglycerate kinase-1, related sequence-7
  • Synonyms
    EG668435
  • Feature Type
    pseudogene
  • IDs
    MGI:97562
    NCBI Gene: 668435
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:10948986-10950240 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 5.53 cM
  • Mapping Data
    1 experiment
Strain
Comparison
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  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_97562
pseudogene Chr12:10948566-10950313 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027089
protein coding gene Chr3:15745549-15747151 (+)
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0026802
protein coding gene Chr3:15837513-15839113 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027506
protein coding gene Chr3:16785948-16787549 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025761
protein coding gene Chr3:148156575-148158266 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0026780
protein coding gene Chr3:17122787-17124387 (+)
DBA/2J MGP_DBA2J_G0026914
protein coding gene Chr3:15286076-15287676 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0027026
protein coding gene Chr3:16375381-16376983 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026903
protein coding gene Chr3:19151297-19152899 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027565
protein coding gene Chr3:15550340-15551942 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0026331
protein coding gene Chr3:15623728-15625328 (+)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Interactions
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Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000066632 Ensembl Gene Model | MGI Sequence Detail 1255 C57BL/6J ±  kb
transcript ENSMUST00000085735 Ensembl | MGI Sequence Detail 1255 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
Other
Accession IDs
less
MGD-MRK-13273, MGI:3648557
References
more
  • Summaries
    All 6
  • Earliest
    J:37006 Potten H, et al., Molecular cloning and sequencing of a murine pgk-1 pseudogene family. Gene. 1988 Nov 30;71(2):461-71
  • Latest
    J:20625 D'Eustachio P, Encyclopedia of the mouse genome III. October 1993. Mouse chromosome 12. Mamm Genome. 1993;4 Spec No:S176-91

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/19/2021
MGI 6.17
The Jackson Laboratory