Pgk1
Gene Detail

Symbol Name ID

Pgk1 phosphoglycerate kinase 1 MGI:97555

STS

DXH1, DXMit64

Synonyms

Pgk-1

Feature Type

protein coding gene

Genetic Map

Chromosome X

47.36 cM, cytoband C-D
Detailed Genetic Map ± 1 cM


Mapping data(63)

Sequence Map

ChrX:106187100-106203699 bp, + strand From VEGA annotation of GRCm38   16600 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:21542  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: phosphoglycerate kinase
Gene Tree: Pgk1

Human homologs

Human Homolog		PGK1, phosphoglycerate kinase 1
NCBI Gene ID		5230
neXtProt AC		NX_P00558
Human Synonyms		MIG10, PGKA
Human Chr (Location)		Xq13.3; chrX:77359666-77382324 (+)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human PGK1

Alleles and phenotypes

All alleles(1) : Gene trapped(1)

Gene Ontology (GO) classifications

All GO classifications: (10 annotations)

Process	carbohydrate metabolic process, gluconeogenesis, ...
Component	cytosol
Function	ADP binding, ATP binding, ...

External Resources: FuncBase

Expression

Literature Summary: (40 records)
Data Summary: Results (281)    Tissues (142)    Images (44)
Theiler Stages: 21, 22, 23, 26, 28

Assay Type	Results
RNA in situ	255
Northern blot	5
RT-PCR	21

cDNA source data(19)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(51) Genomic(18) cDNA(23) Primer pair(5) Other(5)
Microarray probesets(5)

Other database links

VEGA Gene Model	OTTMUSG00000018277 (Evidence)
Ensembl Gene Model	ENSMUSG00000062070 (Evidence)
Entrez Gene	18655 (Evidence)
DFCI	TC1573707
DoTS	DT.101239040, DT.103571053, DT.94210531, DT.94210551
NIA Mouse Gene Index	U020126, U044734, U131082, U165094
EC	2.7.1.38
Consensus CDS Project	CCDS30339.1
International Mouse Knockout Project Status	Pgk1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000018277	VEGA Gene Model | MGI Sequence Detail	16600	C57BL/6J
transcript	OTTMUST00000044166	VEGA | MGI Sequence Detail	1825	Not Applicable
polypeptide	OTTMUSP00000019855	VEGA | MGI Sequence Detail	417	Not Applicable

All sequences(52) RefSeq(2)

Polymorphisms

All PCR and RFLP(8) : PCR(2) RFLP(6) SNPs(54 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
Protein Ontology	PR:000012607	phosphoglycerate kinase 1

References

(Earliest) J:5427 Kozak LP, et al., X linkage of phosphoglycerate kinase in the mouse. Biochem Genet. 1974 Jan;11(1):41-7
(Latest) J:193996 Chauvin T, et al., A systematic analysis of a deep mouse epididymal sperm proteome. Biol Reprod. 2012;87(6):141
All references(146)

Other accession IDs

MGD-MRK-13258, MGD-MRK-13266