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Pam Gene Detail
Summary
  • Symbol
    Pam
  • Name
    peptidylglycine alpha-amidating monooxygenase
  • Synonyms
    PHM
  • Feature Type
    protein coding gene
  • IDs
    MGI:97475
    NCBI Gene: 18484
  • Alliance
  • Transcription Start Sites
    14 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:97821091-98095658 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 47.76 cM
  • Mapping Data
    8 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2982 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_97475
protein coding gene Chr1:97795114-98095658 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016361
protein coding gene Chr1:99571522-99876272 (-)
A/J MGP_AJ_G0016345
protein coding gene Chr1:96081759-96378702 (-)
AKR/J MGP_AKRJ_G0016305
protein coding gene Chr1:98860438-99171790 (-)
BALB/cJ MGP_BALBcJ_G0016301
protein coding gene Chr1:96240986-96546839 (-)
C3H/HeJ MGP_C3HHeJ_G0016128
protein coding gene Chr1:99155815-99448958 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016760
protein coding gene Chr1:103518684-103826862 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014478
protein coding gene Chr1:90352457-90644671 (-)
CAST/EiJ MGP_CASTEiJ_G0015710
protein coding gene Chr1:98276941-98587111 (-)
CBA/J MGP_CBAJ_G0016101
protein coding gene Chr1:106907795-107253018 (-)
DBA/2J MGP_DBA2J_G0016206
protein coding gene Chr1:95289030-95585783 (-)
FVB/NJ MGP_FVBNJ_G0016207
protein coding gene Chr1:94285156-94583606 (-)
LP/J MGP_LPJ_G0016280
protein coding gene Chr1:100860065-101169979 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016233
protein coding gene Chr1:110631558-110947734 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016799
protein coding gene Chr1:98873803-99183013 (-)
PWK/PhJ MGP_PWKPhJ_G0015498
protein coding gene Chr1:94476120-94784208 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015282
protein coding gene Chr1:97707531-98010914 (-)
WSB/EiJ MGP_WSBEiJ_G0015773
protein coding gene Chr1:98709536-99019627 (-)



Homology
more
  • Human Ortholog
    PAM, peptidylglycine alpha-amidating monooxygenase
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PAM, peptidylglycine alpha-amidating monooxygenase
    Orthology source: HomoloGene, HGNC
  • Synonyms
    PAL, PHM
  • Links
    NCBI Gene ID: 5066
    neXtProt AC: NX_P19021
    UniProt: P19021

  • Chr Location
    5q21.1; chr5:102754783-103031105 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    8 phenotypes from 1 allele in 2 genetic backgrounds
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Homozygous mutation of this gene results in embryonic lethality during fetal growth and development, edema, abnormal yolk sac vasculature, thin arterial walls, and abnormal bronchial epithelial morphology.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
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    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 18484 NCBI Gene Model | MGI Sequence Detail 274568 C57BL/6J ±  kb
    transcript NM_013626 RefSeq | MGI Sequence Detail 4149 C57BL/6  
    polypeptide P97467 UniProt | EBI | MGI Sequence Detail 979 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      9 Sequences
    • Protein Ontology
      PR:000012252 peptidyl-glycine alpha-amidating monooxygenase
    • EC
    • InterPro Domains
      IPR024548 Copper type II ascorbate-dependent monooxygenase, C-terminal
      IPR020611 Copper type II, ascorbate-dependent monooxygenase, histidine-cluster-1 conserved site
      IPR014783 Copper type II, ascorbate-dependent monooxygenase, histidine-cluster-2 conserved site
      IPR014784 Copper type II, ascorbate-dependent monooxygenase-like, C-terminal
      IPR000323 Copper type II, ascorbate-dependent monooxygenase, N-terminal
      IPR036939 Copper type II, ascorbate-dependent monooxygenase, N-terminal domain superfamily
      IPR001258 NHL repeat
      IPR013017 NHL repeat, subgroup
      IPR000720 Peptidylglycine alpha-hydroxylating monooxygenase/peptidyl-hydroxyglycine alpha-amidating lyase
      IPR008977 PHM/PNGase F domain superfamily
      IPR011042 Six-bladed beta-propeller, TolB-like
    Molecular
    Reagents
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    • All nucleic 14
      cDNA 11
      Primer pair 3

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGD-MRK-13129
    References
    more
    • Summaries
      All 51
      Developmental Gene Expression 8
      Gene Ontology 6
      Phenotypes 10
    • Earliest
      J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
    • Latest
      J:258871 Kumar D, et al., A bioactive peptide amidating enzyme is required for ciliogenesis. Elife. 2017 May 17;6

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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    Funding Information
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    last database update
    06/11/2019
    MGI 6.14
    The Jackson Laboratory