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Mycn Gene Detail
Summary
  • Symbol
    Mycn
  • Name
    v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived
  • Synonyms
    bHLHe37, Nmyc, N-myc, Nmyc1, Nmyc-1
  • Feature Type
    protein coding gene
  • IDs
    MGI:97357
    NCBI Gene: 18109
  • Gene Overview
    MyGene.info: MYCN
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:12936093-12941836 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 6.14 cM, cytoband A3-B
  • Mapping Data
    19 experiments
Strain
Comparison
more
  • SNPs within 2kb
    65 from dbSNP Build 142
  • Strain Annotations
    18
  • PCR
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_97357
protein coding gene Chr12:12936093-12941914 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019604
protein coding gene Chr12:10167295-10173113 (-)
A/J MGP_AJ_G0019570
protein coding gene Chr12:9842497-9848316 (-)
AKR/J MGP_AKRJ_G0019541
protein coding gene Chr12:10438420-10444241 (-)
BALB/cJ MGP_BALBcJ_G0019547
protein coding gene Chr12:10029196-10035014 (-)
C3H/HeJ MGP_C3HHeJ_G0019352
protein coding gene Chr12:10267751-10273572 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019995
protein coding gene Chr12:10540846-10546664 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017621
protein coding gene Chr12:9517257-9523107 (-)
CAST/EiJ MGP_CASTEiJ_G0018907
protein coding gene Chr12:10149019-10153923 (-)
CBA/J MGP_CBAJ_G0019323
protein coding gene Chr12:11249214-11255035 (-)
DBA/2J MGP_DBA2J_G0019436
protein coding gene Chr12:9801752-9807572 (-)
FVB/NJ MGP_FVBNJ_G0019427
protein coding gene Chr12:9703426-9709247 (-)
LP/J MGP_LPJ_G0019507
protein coding gene Chr12:10289346-10295164 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019461
protein coding gene Chr12:11016099-11021920 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020034
protein coding gene Chr12:10069229-10075047 (-)
PWK/PhJ MGP_PWKPhJ_G0018673
protein coding gene Chr12:9866390-9871321 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018463
protein coding gene Chr12:10204694-10209593 (-)
WSB/EiJ MGP_WSBEiJ_G0018958
protein coding gene Chr12:10166368-10172189 (-)



Homology
more
  • Human Ortholog
    MYCN, MYCN proto-oncogene, bHLH transcription factor
  • Vertebrate Orthologs
    10
  • Human Ortholog
    MYCN, MYCN proto-oncogene, bHLH transcription factor
    Orthology source: HomoloGene, HGNC
  • Synonyms
    bHLHe37, MODED, N-myc, NMYC, ODED
  • Links
    NCBI Gene ID: 4613
    neXtProt AC: NX_P04198
    UniProt: P04198

  • Chr Location
    2p24.3; chr2:15940438-15947007 (+)  GRCh38.p7

Human Diseases
more
  • Diseases
    1 with human MYCN associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    3 with disease annotations
  • References
    10 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    106 phenotypes from 11 alleles in 9 genetic backgrounds
    15 phenotypes from multigenic genotypes
    4 images
    96 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Homozygotes for targeted null mutations exhibit impaired development of the mesonephric tubules, neuroepithelium, sensory ganglia, heart, lung, stomach, and liver. Mutants die around embryonic day 11.5.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 18109 NCBI Gene Model | MGI Sequence Detail 5744 C57BL/6J ±  kb
    transcript NM_008709 RefSeq | MGI Sequence Detail 2596 C57BL/6  
    polypeptide P03966 UniProt | EBI | MGI Sequence Detail 462 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 79
      Genomic 7
      cDNA 59
      Primer pair 6
      Other 7

      Microarray probesets 7
    Other
    Accession IDs
    less
    MGD-MRK-12903, MGD-MRK-12905
    References
    more
    • Summaries
      All 291
      Developmental Gene Expression 140
      Diseases 10
      Gene Ontology 11
      Phenotypes 96
    • Earliest
      J:7964 Yancopoulos GD, et al., N-myc can cooperate with ras to transform normal cells in culture. Proc Natl Acad Sci U S A. 1985 Aug;82(16):5455-9
    • Latest
      J:262736 Renard M, et al., Expressed repetitive elements are broadly applicable reference targets for normalization of reverse transcription-qPCR data in mice. Sci Rep. 2018 May 16;8(1):7642

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    last database update
    11/06/2018
    MGI 6.13
    The Jackson Laboratory