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Ncam2
Gene Detail
Symbol

Name
ID
Ncam2
neural cell adhesion molecule 2
MGI:97282
Synonyms
Ncam-2, Ocam, R4B12 antigen, RNCAM
Feature Type
protein coding gene
Genetic Map
Chromosome 16
45.89 cM, cytoband C1-3
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr16:81200697-81624285 bp, + strand
From VEGA annotation of GRCm38

  423589 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:3336  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

Protein SuperFamily: cell adhesion molecule, NCAM/Fasciclin-2 types
Gene Tree: Ncam2

Human
homologs
Human Homolog NCAM2, neural cell adhesion molecule 2
NCBI Gene ID 4685
neXtProt AC  NX_O15394
Human Synonyms  NCAM21
Human Chr (Location)  21q21.1; chr21:20998315-21541571 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(16) : Gene trapped(8) Targeted(8)
Genomic Mutations involving Ncam2 (2)
Incidental mutations (data from Mutagenetix , APF )
 
A gene trap insertion into an intron of this gene results in no obvious phenotype.
 
Interactions
Ncam2 interacts with 304 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process cell adhesion
Component anchored component of membrane, axon, ...
External Resources: FuncBase
Expression
Literature Summary: (22 records)
Data Summary: Results (212)    Tissues (133)    Images (22)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 194
RT-PCR 18
cDNA source data(21)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(25) Genomic(1) cDNA(21) Primer pair(3)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000014960 (Evidence)
Ensembl Gene ModelENSMUSG00000022762 (Evidence)
Entrez Gene17968 (Evidence)
UniGene433941
DFCITC1585618, TC1590900
DoTSDT.55270383, DT.87050236, DT.94137365
NIA Mouse Gene IndexU017313
Consensus CDS ProjectCCDS28281.1, CCDS49888.1
International Mouse Knockout Project StatusNcam2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000014960 VEGA Gene Model | MGI Sequence Detail 423589 C57BL/6J ±  kb
transcript OTTMUST00000035517 VEGA | MGI Sequence Detail 3563 Not Applicable 
polypeptide OTTMUSP00000015902 VEGA | MGI Sequence Detail 837 Not Applicable 

For the selected sequences
All sequences(37) RefSeq(4) UniProt(5)
Polymorphisms
SNPs within 2kb(1155 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR003961 Fibronectin, type III
InterPro IPR013098 Immunoglobulin I-set
InterPro IPR007110 Immunoglobulin-like domain
InterPro IPR013783 Immunoglobulin-like fold
InterPro IPR003598 Immunoglobulin subtype 2
InterPro IPR009138 Neural cell adhesion
Protein Ontology PR:000011018 neural cell adhesion molecule 2
References
(Earliest) J:41769 Yoshihara Y, et al., OCAM: A new member of the neural cell adhesion molecule family related to zone-to-zone projection of olfactory and vomeronasal axons. J Neurosci. 1997 Aug 1;17(15):5830-42
(Latest) J:208419 Basta JM, et al., Sall1 balances self-renewal and differentiation of renal progenitor cells. Development. 2014 Mar;141(5):1047-58
All references(60)
Other
accession IDs
MGD-MRK-12787, MGD-MRK-12788, MGI:1095738

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory