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Ldha-ps2 Pseudogene Detail
Summary
  • Symbol
    Ldha-ps2
  • Name
    lactate dehydrogenase A, pseudogene 2
  • Synonyms
    Ldh-1ps2
  • Feature Type
    pseudogene
  • IDs
    MGI:96761
    NCBI Gene: 16830
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:119334389-119335445 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 55.35 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    34 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_96761
pseudogene Chr4:119333880-119335542 (-)
129S1/SvImJ MGP_129S1SvImJ_G0012849
pseudogene Chr4:120524506-120525913 (-)
A/J MGP_AJ_G0012834
pseudogene Chr4:115789924-115791545 (-)
AKR/J MGP_AKRJ_G0012804
pseudogene Chr4:118298619-118303057 (-)
BALB/cJ MGP_BALBcJ_G0012813
pseudogene Chr4:116416598-116417654 (-)
C3H/HeJ MGP_C3HHeJ_G0012672
pseudogene Chr4:119872141-119873197 (-)
C57BL/6NJ MGP_C57BL6NJ_G0013152
pseudogene Chr4:125098893-125099949 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0012648
pseudogene Chr4:128485216-128486272 (-)
DBA/2J MGP_DBA2J_G0012709
pseudogene Chr4:116381283-116382344 (-)
FVB/NJ MGP_FVBNJ_G0012712
pseudogene Chr4:114900148-114901853 (-)
LP/J MGP_LPJ_G0012785
pseudogene Chr4:120641677-120643201 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0013164
pseudogene Chr4:119376379-119378065 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Genomic Mutations
    3 involving Ldha-ps2
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000083836 Ensembl Gene Model | MGI Sequence Detail 1057 C57BL/6J ±  kb
transcript ENSMUST00000118722 Ensembl | MGI Sequence Detail 1057 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Genomic 2
Other
Accession IDs
less
MGD-MRK-11764, MGD-MRK-11770
References
more
  • Summaries
    All 10
    Phenotypes 3
  • Earliest
    J:8625 Fukasawa KM, et al., Molecular nature of spontaneous mutations in mouse lactate dehydrogenase-A processed pseudogenes. Genetics. 1987 Jan;115(1):177-84

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/22/2020
MGI 6.16
The Jackson Laboratory