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Hist2h2aa1 Gene Detail
Summary
  • Symbol
    Hist2h2aa1
  • Name
    histone cluster 2, H2aa1
  • Synonyms
    H2a-615, Hist2
  • Feature Type
    protein coding gene
  • IDs
    MGI:96097
    NCBI Gene: 15267
Location & Maps
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  • Genetic Map
    Chromosome 3, 41.69 cM, cytoband F1-F2
  • Mapping Data
    3 experiments
Homology
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  • Human Ortholog
    HIST2H2AA3, histone cluster 2, H2aa3
  • Vertebrate Orthologs
    9
  • Human Ortholog
    HIST2H2AA3, histone cluster 2, H2aa3
    Orthology source: HGNC, HomoloGene
  • Synonyms
    H2A, H2A.2, H2a-615, H2AFO, H2A/O, H2A/q, HIST2H2AA
  • Links
    NCBI Gene ID: 8337
    neXtProt AC: NX_Q6FI13

  • Chr Location
    1q21.2; chr1:149842218-149842751 (-)  GRCh38.p2

  • Human Ortholog
    HIST2H2AA4, histone cluster 2, H2aa4
    Orthology source: HGNC, HomoloGene
  • Synonyms
    H2A/R
  • Links
    NCBI Gene ID: 723790
    neXtProt AC: NX_Q6FI13

  • Chr Location
    1q21.2; chr1:149851061-149851594 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Hist2h2aa1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000042073 VEGA Gene Model | MGI Sequence Detail 586 C57BL/6J ±  kb
transcript OTTMUST00000110343 VEGA | MGI Sequence Detail 586 Not Applicable  
polypeptide OTTMUSP00000061532 VEGA | MGI Sequence Detail 130 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    3 from dbSNP Build 142
Molecular
Reagents
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  • All nucleic 14
    Genomic 4
    cDNA 9
    Other 1

    Microarray probesets 3
Other
Accession IDs
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MGD-MRK-10729, MGI:2139710
References
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  • Summaries
    All 31
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:7225 Sittman DB, et al., Structure of a cluster of mouse histone genes. Nucleic Acids Res. 1983 Oct 11;11(19):6679-97
  • Latest
    J:226026 Deuve JL, et al., Antagonist Xist and Tsix co-transcription during mouse oogenesis and maternal Xist expression during pre-implantation development calls into question the nature of the maternal imprint on the X chromosome. Epigenetics. 2015 Oct 3;10(10):931-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/15/2016
MGI 6.04
The Jackson Laboratory