H2-T22
Gene Detail

Symbol Name ID

H2-T22 histocompatibility 2, T region locus 22 MGI:95956

Synonyms

H-2T17, H2-T17, H-2T22

Feature Type

protein coding gene

Genetic Map

Chromosome 17

18.87 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr17:36037128-36042747 bp, - strand From VEGA annotation of GRCm38   5620 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:79525  Vertebrate Homology Class
1 mouse; 2 rat

Protein SuperFamily: class I histocompatibility antigen
Gene Tree: H2-T22

Gene Ontology (GO) classifications

All GO classifications: (3 annotations)

Process	biological_process
Component	cellular_component
Function	molecular_function

External Resources: FuncBase

Expression

Literature Summary: (3 records)
Data Summary: Results (589)    Tissues (80)    Images (72)
Theiler Stages: 15, 19, 20, 22, 23, 28

Assay Type	Results
RNA in situ	565
RT-PCR	24

cDNA source data(12)
External Resources: Allen Institute   GENSAT   GEO   ArrayExpress

Molecular reagents

All nucleic(24) Genomic(8) cDNA(13) Primer pair(1) Other(2)
Microarray probesets(2)

Other database links

VEGA Gene Model	OTTMUSG00000014954 (Evidence)
Ensembl Gene Model	ENSMUSG00000056116 (Evidence)
Entrez Gene	15039 (Evidence)
PDB	1YPZ, 1C16
Consensus CDS Project	CCDS37608.1
International Mouse Knockout Project Status	H2-T22

Sequences

Length	Strain/Species
genomic	OTTMUSG00000014954	VEGA Gene Model | MGI Sequence Detail	5620	C57BL/6J
transcript	OTTMUST00000035504	VEGA | MGI Sequence Detail	1761	Not Applicable
polypeptide	OTTMUSP00000015892	VEGA | MGI Sequence Detail	379	Not Applicable

All sequences(38) RefSeq(3) UniProt(6)

Polymorphisms

RFLP(4) : SNPs(44 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR003597	Immunoglobulin C1-set
InterPro	IPR007110	Immunoglobulin-like
InterPro	IPR013783	Immunoglobulin-like fold
InterPro	IPR003006	Immunoglobulin/major histocompatibility complex, conserved site
InterPro	IPR011162	MHC classes I/II-like antigen recognition protein
InterPro	IPR001039	MHC class I, alpha chain, alpha1/alpha2
InterPro	IPR011161	MHC class I-like antigen recognition

References

(Earliest) J:20104 Steinmetz M, et al., Clusters of genes encoding mouse transplantation antigens. Cell. 1982 Mar;28(3):489-98
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(25)

Other accession IDs

MGD-MRK-10432, MGD-MRK-10438, MGD-MRK-10545, MGD-MRK-10552, MGI:95949