Slc39a7
Gene Detail

Symbol Name ID

Slc39a7 solute carrier family 39 (zinc transporter), member 7 MGI:95909

Synonyms

H-2Ke4, H2-Ke4, Ke-4, KE4, Ring5, Zip7

Feature Type

protein coding gene

Genetic Map

Chromosome 17

17.98 cM
Detailed Genetic Map ± 1 cM


Mapping data(5)

Sequence Map

Chr17:34028269-34031682 bp, - strand From VEGA annotation of GRCm38   3414 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:5072  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 zebrafish

Gene Tree: Slc39a7

Human homologs

Human Homolog		SLC39A7, solute carrier family 39 (zinc transporter), member 7
NCBI Gene ID		7922
neXtProt AC		NX_Q92504
Human Synonyms		D6S115E, D6S2244E, H2-KE4, HKE4, KE4, RING5, ZIP7
Human Chr (Location)		6p21.3; chr6:33200826-33204437 (+)  GRCh38

Mutations, alleles, and phenotypes

All mutations/alleles(3) : Targeted(3)
Incidental mutations (data from Mutagenetix , APF )

Interactions

Slc39a7 interacts with 53 markers (Mir34a, Mir34b, Mir34c, ...)

View All

Gene Ontology (GO) classifications

All GO classifications: (12 annotations)

Process	ion transport, metal ion transport, ...
Component	endoplasmic reticulum, Golgi apparatus, ...
Function	metal ion transmembrane transporter activity, protein binding

External Resources: FuncBase

Expression

Literature Summary: (3 records)

Data Summary: Results (16)    Tissues (11)    Images (2)
Theiler Stages: 9, 16, 23, 28

Assay Type	Results
RNA in situ	1
Northern blot	6
RT-PCR	9

cDNA source data(183)
External Resources: Allen Institute   GEO   Expression Atlas

Molecular reagents

All nucleic(198) Genomic(10) cDNA(186) Primer pair(2)
Microarray probesets(2)

Other database links

VEGA Gene Model	OTTMUSG00000035430 (Evidence)
Ensembl Gene Model	ENSMUSG00000024327 (Evidence)
Entrez Gene	14977 (Evidence)
UniGene	18556
DFCI	TC1572519, TC1601731, TC1666150
Consensus CDS Project	CCDS37576.1
International Mouse Knockout Project Status	Slc39a7

Sequences

Length	Strain/Species
genomic	OTTMUSG00000035430	VEGA Gene Model | MGI Sequence Detail	3414	C57BL/6J
transcript	OTTMUST00000090595	VEGA | MGI Sequence Detail	2244	Not Applicable
polypeptide	OTTMUSP00000049736	VEGA | MGI Sequence Detail	476	Not Applicable

All sequences(54) RefSeq(4) UniProt(3)

Polymorphisms

SNPs within 2kb(61 from dbSNP Build 137)

Protein-related information

Resource	ID	Description
InterPro	IPR003689	Zinc/iron permease
Protein Ontology	PR:000015134	zinc transporter SLC39A7

References

(Earliest) J:9525 Abe K, et al., Searching for coding sequences in the mammalian genome: the H-2K region of the mouse MHC is replete with genes expressed in embryos. EMBO J. 1988 Nov;7(11):3441-9
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(46)

Other accession IDs

MGD-MRK-10394, MGD-MRK-10505, MGI:2146748, MGI:2146797, MGI:2146956