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H2-K2 Pseudogene Detail
Summary
  • Symbol
    H2-K2
  • Name
    histocompatibility 2, K region locus 2
  • Synonyms
    H-2K1, H2-K1, H-2K1K, H-2K2
  • Feature Type
    pseudogene
  • IDs
    MGI:95906
    NCBI Gene: 630499
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:33974659-33978791 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 17.98 cM
  • Mapping Data
    6 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2 from dbSNP Build 142
  • Strain Annotations
    4
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_95906
pseudogene Chr17:33974659-33978827 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0040142
pseudogene Chr17:32758080-32762390 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0040128
pseudogene Chr17:32930036-32934446 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0040718
pseudogene Chr17:35213116-35219768 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 630499 NCBI Gene Model | MGI Sequence Detail 4133 C57BL/6J ±  kb
transcript NR_004446 RefSeq | MGI Sequence Detail 1324 Not Specified  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 46
    Genomic 27
    cDNA 4
    Other 15

    Microarray probesets 4
Other
Accession IDs
less
MGD-MRK-10389, MGD-MRK-10390, MGD-MRK-10501, MGD-MRK-10502, MGI:3644203, MGI:95905
References
more
  • Summaries
    All 32
    Developmental Gene Expression 1
    Phenotypes 1
  • Earliest
    J:7080 Winoto A, et al., Genetic mapping in the major histocompatibility complex by restriction enzyme site polymorphisms: most mouse class I genes map to the Tla complex. Proc Natl Acad Sci U S A. 1983 Jun;80(11):3425-9
  • Latest
    J:240923 Chen S, et al., Intestinal NCoR1, a regulator of epithelial cell maturation, controls neonatal hyperbilirubinemia. Proc Natl Acad Sci U S A. 2017 Feb 21;114(8):E1432-E1440

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory