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Stom Gene Detail
Summary
  • Symbol
    Stom
  • Name
    stomatin
  • Synonyms
    Epb7.2, protein 7.2b, stomatin
  • Feature Type
    protein coding gene
  • IDs
    MGI:95403
    NCBI Gene: 13830
  • Gene Overview
    MyGene.info: STOM
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:35313986-35336976 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 23.53 cM, cytoband B-C1
  • Mapping Data
    9 experiments
Strain
Comparison
more
  • SNPs within 2kb
    113 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_95403
protein coding gene Chr2:35313986-35337009 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025652
protein coding gene Chr2:33945534-33968520 (-)
A/J MGP_AJ_G0025629
protein coding gene Chr2:32509296-32532290 (-)
AKR/J MGP_AKRJ_G0025599
protein coding gene Chr2:33651276-33674270 (-)
BALB/cJ MGP_BALBcJ_G0025626
protein coding gene Chr2:32618067-32641057 (-)
C3H/HeJ MGP_C3HHeJ_G0025386
protein coding gene Chr2:33543477-33566467 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026070
protein coding gene Chr2:34922785-34945761 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023479
protein coding gene Chr2:31193167-31216038 (-)
CAST/EiJ MGP_CASTEiJ_G0024848
protein coding gene Chr2:33535303-33558313 (-)
CBA/J MGP_CBAJ_G0025364
protein coding gene Chr2:36266692-36289686 (-)
DBA/2J MGP_DBA2J_G0025497
protein coding gene Chr2:32274055-32297044 (-)
FVB/NJ MGP_FVBNJ_G0025459
protein coding gene Chr2:32171251-32194241 (-)
LP/J MGP_LPJ_G0025583
protein coding gene Chr2:33872210-33895198 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025490
protein coding gene Chr2:35773663-35796653 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026128
protein coding gene Chr2:33537101-33560093 (-)
PWK/PhJ MGP_PWKPhJ_G0024596
protein coding gene Chr2:32188472-32211649 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024396
protein coding gene Chr2:33704515-33728402 (-)
WSB/EiJ MGP_WSBEiJ_G0024917
protein coding gene Chr2:33720001-33742973 (-)



Homology
more
  • Human Ortholog
    STOM, stomatin
  • Vertebrate Orthologs
    10
  • Human Ortholog
    STOM, stomatin
    Orthology source: HGNC, HomoloGene
  • Synonyms
    BND7, EPB7, EPB72
  • Links
    NCBI Gene ID: 2040
    neXtProt AC: NX_P27105
    UniProt: P27105

  • Chr Location
    9q33.2; chr9:121338988-121370304 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 81681
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: STOM
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    5 phenotype references
Homozygotes for a targeted null mutation lack the protein but appear phenotypically normal.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000026880 Ensembl Gene Model | MGI Sequence Detail 22991 C57BL/6J ±  kb
transcript ENSMUST00000028241 Ensembl | MGI Sequence Detail 2787 Not Applicable  
polypeptide ENSMUSP00000028241 Ensembl | MGI Sequence Detail 284 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 107
    Genomic 5
    cDNA 100
    Other 2

    Microarray probesets 10
Other
Accession IDs
less
MGD-MRK-9561
References
more
  • Summaries
    All 38
    Developmental Gene Expression 2
    Gene Ontology 5
    Phenotypes 5
  • Earliest
    J:18140 Rowe LB, et al., Maps from two interspecific backcross DNA panels available as a community genetic mapping resource [published erratum appears in Mamm Genome 1994 Jul;5(7):463]. Mamm Genome. 1994 May;5(5):253-74
  • Latest
    J:218041 Kim JH, et al., Interaction of stomatin with hepatitis C virus RNA polymerase stabilizes the viral RNA replicase complexes on detergent-resistant membranes. J Microbiol Biotechnol. 2014 Dec 28;24(12):1744-54

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory