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Stom
Gene Detail
Symbol

Name
ID
Stom
stomatin
MGI:95403
Synonyms
Epb7.2, protein 7.2b, stomatin
Feature Type
protein coding gene
Genetic Map
Chromosome 2
23.53 cM, cytoband B-C1
Detailed Genetic Map ± 1 cM


Mapping data(9)
Sequence Map
Chr2:35313986-35336976 bp, - strand
From VEGA annotation of GRCm38

  22991 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:81681  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: STOM
Gene Tree: Stom

Human
homologs
STOM, stomatin
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 2040
neXtProt AC: NX_P27105

Human Synonyms: BND7, EPB7, EPB72

Human Chr (Location): 9q34.1; chr9:121338988-121370304 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human STOM

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
 
Homozygotes for a targeted null mutation lack the protein but appear phenotypically normal.
 
Interactions
Stom interacts with 209 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (2 records)
Data Summary: Results (34)    Tissues (7)    Images (21)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 34
cDNA source data(99)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase stom    NEW 
Molecular
reagents
All nucleic(106) Genomic(5) cDNA(99) Other(2)
Microarray probesets(10)
Other database
links
VEGA Gene Model OTTMUSG00000012089 (Evidence)
Ensembl Gene Model ENSMUSG00000026880 (Evidence)
Entrez Gene 13830 (Evidence)
UniGene 295284
DFCI TC1572058, TC1593151
DoTS DT.55260944, DT.97351252, DT.99846992
NIA Mouse Gene Index U022542
PDB 4FVF, 4FVG, 4FVJ
Consensus CDS Project CCDS15961.1
International Mouse Phenotyping Consortium Status Stom
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000012089 VEGA Gene Model | MGI Sequence Detail 22991 C57BL/6J ±  kb
transcript OTTMUST00000028766 VEGA | MGI Sequence Detail 2787 Not Applicable 
polypeptide OTTMUSP00000013019 VEGA | MGI Sequence Detail 284 Not Applicable 

For the selected sequences
All sequences(40) RefSeq(2) UniProt(3)
Polymorphisms
RFLP(2) : SNPs within 2kb(113 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001107 Band 7 protein
InterPro IPR018080 Band 7/stomatin-like, conserved site
InterPro IPR001972 Stomatin
Protein Ontology PR:000015763 erythrocyte band 7 integral membrane protein
References
(Earliest) J:18140 Rowe LB, et al., Maps from two interspecific backcross DNA panels available as a community genetic mapping resource [published erratum appears in Mamm Genome 1994 Jul;5(7):463]. Mamm Genome. 1994 May;5(5):253-74
(Latest) J:218041 Kim JH, et al., Interaction of stomatin with hepatitis C virus RNA polymerase stabilizes the viral RNA replicase complexes on detergent-resistant membranes. J Microbiol Biotechnol. 2014 Dec 28;24(12):1744-54
All references(39)
Other
accession IDs
MGD-MRK-9561

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory