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Oaf Gene Detail
Summary
  • Symbol
    Oaf
  • Name
    out at first homolog
  • Synonyms
    D130038B21Rik, D9Ucla1
  • Feature Type
    protein coding gene
  • IDs
    MGI:94852
    NCBI Gene: 102644
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:43132575-43151113 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 24.24 cM
  • Mapping Data
    6 experiments
Strain
Comparison
more
  • SNPs within 2kb
    246 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_94852
protein coding gene Chr9:43132532-43151208 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034683
protein coding gene Chr9:41607728-41626263 (-)
A/J MGP_AJ_G0034663
protein coding gene Chr9:40493673-40512006 (-)
AKR/J MGP_AKRJ_G0034589
protein coding gene Chr9:41282008-41300534 (-)
BALB/cJ MGP_BALBcJ_G0034654
protein coding gene Chr9:40220420-40238925 (-)
C3H/HeJ MGP_C3HHeJ_G0034365
protein coding gene Chr9:41775001-41793494 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035177
protein coding gene Chr9:42868416-42887763 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032090
protein coding gene Chr9:40104125-40122472 (-)
CAST/EiJ MGP_CASTEiJ_G0033688
protein coding gene Chr9:41591959-41610520 (-)
CBA/J MGP_CBAJ_G0034338
protein coding gene Chr9:44388291-44406877 (-)
DBA/2J MGP_DBA2J_G0034497
protein coding gene Chr9:40406409-40424894 (-)
FVB/NJ MGP_FVBNJ_G0034437
protein coding gene Chr9:39642585-39666246 (-)
LP/J MGP_LPJ_G0034578
protein coding gene Chr9:41897682-41916104 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034481
protein coding gene Chr9:46331043-46350847 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035196
protein coding gene Chr9:41192087-41210603 (-)
PWK/PhJ MGP_PWKPhJ_G0033393
protein coding gene Chr9:40256137-40275530 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033229
protein coding gene Chr9:41483913-41502917 (-)
WSB/EiJ MGP_WSBEiJ_G0033801
protein coding gene Chr9:41242541-41262914 (-)



Homology
more
  • Human Ortholog
    OAF, out at first homolog
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OAF, out at first homolog
  • Synonyms
    NS5ATP13TP2
  • Links
    NCBI Gene ID: 220323
    neXtProt AC: NX_Q86UD1
    UniProt: Q86UD1

  • Chr Location
    11q23.3; chr11:120211039-120229941 (+)  GRCh38.p7

  • Alliance of Genome Resources
    Oaf stringent orthology
    1 human;1 mouse;1 rat;2 zebrafish
  • HCOP
    vertebrate homology predictions: OAF
  • Gene Tree
    Oaf
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 102644 NCBI Gene Model | MGI Sequence Detail 18539 C57BL/6J ±  kb
    transcript NM_178644 RefSeq | MGI Sequence Detail 2388 C57BL/6  
    polypeptide Q8QZR4 UniProt | EBI | MGI Sequence Detail 282 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 76
      cDNA 75
      Other 1

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGD-MRK-8786, MGI:2143181
    References
    more
    • Summaries
      All 31
      Phenotypes 7
    • Earliest
      J:15567 Warden CH, et al., Linkage mapping of 40 randomly isolated liver cDNA clones in the mouse. Genomics. 1993 Nov;18(2):295-307
    • Latest
      J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    last database update
    10/05/2021
    MGI 6.17
    The Jackson Laboratory