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D1Pas1
Gene Detail
Symbol

Name
ID
D1Pas1
DNA segment, Chr 1, Pasteur Institute 1
MGI:91842
Synonyms
Pl10
Feature Type
protein coding gene
Genetic Map
Chromosome 1
90.09 cM
Detailed Genetic Map ± 1 cM


Mapping data(5)
Sequence Map
Chr1:186967416-186970627 bp, + strand
From VEGA annotation of GRCm38

  3212 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:135966  Vertebrate Homology Class
1 mouse; 1 rat; 2 zebrafish

Protein SuperFamily: ATP-dependent RNA helicase
Gene Tree: D1Pas1

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(3) Targeted(1)
Incidental mutations (data from APF )
Interactions
D1Pas1 interacts with 158 markers (Mir7-1, Mir9-1, Mir9-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process cell differentiation, multicellular organismal development, ...
Function ATP binding, DNA binding, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(5)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(5) cDNA(5)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000029142 (Evidence)
Ensembl Gene ModelENSMUSG00000039224 (Evidence)
Entrez Gene110957 (Evidence)
DFCITC1588825, TC1651073
DoTSDT.101366751, DT.40173995
NIA Mouse Gene IndexU001254
EC3.6.4.13
Consensus CDS ProjectCCDS15603.1
International Mouse Knockout Project StatusD1Pas1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000029142 VEGA Gene Model | MGI Sequence Detail 3212 C57BL/6J ±  kb
transcript OTTMUST00000072281 VEGA | MGI Sequence Detail 3212 Not Applicable 
polypeptide OTTMUSP00000037151 VEGA | MGI Sequence Detail 660 Not Applicable 

For the selected sequences
All sequences(25) RefSeq(2) UniProt(3)
Polymorphisms
RFLP(2) : SNPs within 2kb(17 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
InterPro IPR001650 Helicase, C-terminal
InterPro IPR014001 Helicase, superfamily 1/2, ATP-binding domain
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site
InterPro IPR014014 RNA helicase, DEAD-box type, Q motif
Protein Ontology PR:000034400 ATP-dependent RNA helicase Pl10
References
(Earliest) J:9437 Leroy P, et al., Testis-specific transcripts detected by a human Y-DNA-derived probe. Development. 1987;101 Suppl:177-83
(Latest) J:110867 Vong QP, et al., Structural characterization and expression studies of dby and its homologs in the mouse. J Androl. 2006 Sep-Oct;27(5):653-61
All references(30)
Other
accession IDs
MGD-MRK-5700, MGI:2138412

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory