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Ppfibp2 Gene Detail
Summary
  • Symbol
    Ppfibp2
  • Name
    PTPRF interacting protein, binding protein 2 (liprin beta 2)
  • Synonyms
    Cclp1, liprin beta 2
  • Feature Type
    protein coding gene
  • IDs
    MGI:894649
    NCBI Gene: 19024
Location & Maps
more
  • Sequence Map
    Chr7:107595207-107748583 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      153377 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 57.21 cM, cytoband F2
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    PPFIBP2, PPFIA binding protein 2
  • Vertebrate Orthologs
    9
  • Human Ortholog
    PPFIBP2, PPFIA binding protein 2
    Orthology source: HGNC, HomoloGene
  • Synonyms
    Cclp1
  • Links
    NCBI Gene ID: 8495
    neXtProt AC: NX_Q8ND30

  • Chr Location
    11p15.4; chr11:7513765-7667344 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    15 phenotype references
  • All Mutations and Alleles
    28
  • Chemically induced (other)
    1
  • Gene trapped
    23
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    2 involving Ppfibp2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000059746 VEGA Gene Model | MGI Sequence Detail 153377 C57BL/6J ±  kb
transcript OTTMUST00000146448 VEGA | MGI Sequence Detail 3827 Not Applicable  
polypeptide OTTMUSP00000076244 VEGA | MGI Sequence Detail 904 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    1911 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 102
    Genomic 1
    cDNA 100
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 15
  • Earliest
    J:40773 Noben-Trauth K, et al., Cloning and expression analysis of mouse Cclp1, a new gene encoding a coiled-coil-like protein. Biochim Biophys Acta. 1997 May 30;1352(2):133-7
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/15/2016
MGI 6.04
The Jackson Laboratory