Tmem165
Gene Detail

Symbol Name ID

Tmem165 transmembrane protein 165 MGI:894407

Synonyms

pFT27, Tpardl, Tparl

Feature Type

protein coding gene

Genetic Map

Chromosome 5

40.56 cM
Detailed Genetic Map ± 1 cM


Mapping data(6)

Sequence Map

Chr5:76183880-76209245 bp, + strand From VEGA annotation of GRCm38   25366 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:5411  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Tmem165

Human homologs

Human Homolog		TMEM165, transmembrane protein 165
NCBI Gene ID		55858
neXtProt AC		NX_Q9HC07
Human Synonyms		CDG2K, FT27, GDT1, TMPT27, TPARL
Human Chr (Location)		4q12; chr4:56262080-56292342 (+)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human TMEM165

Alleles and phenotypes

All alleles(4) : Targeted(2) Gene trapped(2)

Gene Ontology (GO) classifications

All GO classifications: (12 annotations)

Process	cellular calcium ion homeostasis, Golgi calcium ion transport, ...
Component	endosome membrane, Golgi apparatus, ...
Function	molecular_function

External Resources: FuncBase

Expression

cDNA source data(129)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(133) Genomic(4) cDNA(129)
Microarray probesets(4)

Other database links

VEGA Gene Model	OTTMUSG00000026458 (Evidence)
Ensembl Gene Model	ENSMUSG00000029234 (Evidence)
Entrez Gene	21982 (Evidence)
UniGene	790
DoTS	DT.495419, DT.55128413, DT.99851257
NIA Mouse Gene Index	U005699
Consensus CDS Project	CCDS19359.1
International Mouse Knockout Project Status	Tmem165

Sequences

Length	Strain/Species
genomic	OTTMUSG00000026458	VEGA Gene Model | MGI Sequence Detail	25366	C57BL/6J
transcript	OTTMUST00000065429	VEGA | MGI Sequence Detail	1897	Not Applicable
polypeptide	OTTMUSP00000032613	VEGA | MGI Sequence Detail	323	Not Applicable

All sequences(43) RefSeq(2) UniProt(3)

Polymorphisms

SNPs(159 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR001727	Uncharacterised protein family UPF0016
Protein Ontology	PR:000031748	transmembrane protein 165

References

(Earliest) J:39942 Akagi J, et al., Messenger RNA expressed in mouse teratocarcinoma stem cells and down-regulated by a tumor-promoting phorbol ester codes for a novel transmembrane protein. Biochem Biophys Res Commun. 1988 Dec 15;157(2):548-57
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(36)

Other accession IDs

MGI:2141106