About   Help   FAQ
Ebf2 Gene Detail
Summary
  • Symbol
    Ebf2
  • Name
    early B cell factor 2
  • Synonyms
    D14Ggc1e, Mmot1, O/E-3
  • Feature Type
    protein coding gene
  • IDs
    MGI:894332
    NCBI Gene: 13592
Location & Maps
more
  • Sequence Map
    Chr14:67233292-67430918 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      197627 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 34.63 cM, cytoband D-E1
  • Mapping Data
    6 experiments
Homology
more
  • Human Ortholog
    EBF2, early B-cell factor 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    EBF2, early B-cell factor 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    COE2, EBF-2, O/E-3, OE-3
  • Links
    NCBI Gene ID: 64641
    neXtProt AC: NX_Q9HAK2
    UniProt: Q9HAK2

  • Chr Location
    8p21.2; chr8:25841730-26045124 (-)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    45 phenotypes from 8 alleles in 9 genetic backgrounds
    4 phenotypes from multigenic genotypes
    20 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Homozygous null mutants show decreased viability, impaired olfactory neuron projection, and impaired mating, more so in male mice. Mice homozygous for another knock-out allele exhibit narcolepsy-cataplexy syndrome and decreased orexinergic neurons.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    18
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    205
  • Tissues
    164
  • cDNA Data
    41
  • Literature Summary
    43
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000040034 VEGA Gene Model | MGI Sequence Detail 197627 C57BL/6J ±  kb
transcript OTTMUST00000103954 VEGA | MGI Sequence Detail 4352 Not Applicable  
polypeptide OTTMUSP00000058129 VEGA | MGI Sequence Detail 575 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    907 from dbSNP Build 142
  • PCR
    1
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 46
    cDNA 42
    Primer pair 3
    Other 1

    Microarray probesets 5
Other
Accession IDs
less
MGD-MRK-34015, MGI:106323, MGI:894328
References
more
  • Summaries
    All 78
    Developmental Gene Expression 43
    Gene Ontology 5
    Phenotypes 20
  • Earliest
    J:37805 Cornwall GA, et al., ADAM7, a member of the ADAM (a disintegrin and metalloprotease) gene family is specifically expressed in the mouse anterior pituitary and epididymis. Endocrinology. 1997 Oct;138(10):4262-72
  • Latest
    J:242541 Bizzoca A, et al., The gene encoding the mouse contactin-1 axonal glycoprotein is regulated by the collier/Olf1/EBF family early B-Cell factor 2 transcription factor. Dev Neurobiol. 2015 Dec;75(12):1420-40
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support. 		last database update
08/15/2017
MGI 6.10 		The Jackson Laboratory