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Rab21
Gene Detail
Symbol

Name
ID
Rab21
RAB21, member RAS oncogene family
MGI:894308
Feature Type
protein coding gene
Genetic Map
Chromosome 10
63.51 cM, cytoband D1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr10:115289863-115315591 bp, - strand
From Ensembl annotation of GRCm38

  25729 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8991  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: Ras-related protein Rab
Gene Tree: Rab21

Human
homologs
Human Homolog RAB21, RAB21, member RAS oncogene family
NCBI Gene ID 23011
neXtProt AC  NX_Q9UL25
Human Chr (Location)  12q21.1; chr12:71754878-71787370 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(6) : Gene trapped(4) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Rab21 interacts with 241 markers (Mir7-1, Mir15a, Mir16-2, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (2 records)
Data Summary: Results (50)    Tissues (10)    Images (22)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 50
cDNA source data(77)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(77) cDNA(77)
Microarray probesets(2)
Other database
links
Ensembl Gene ModelENSMUSG00000020132 (Evidence)
Entrez Gene216344 (Evidence)
UniGene21936
DFCITC1578353, TC1613430, TC1605510
DoTSDT.87048950, DT.101735314
NIA Mouse Gene IndexU032234
Consensus CDS ProjectCCDS24177.1
International Mouse Knockout Project StatusRab21
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020132 Ensembl Gene Model | MGI Sequence Detail 25729 C57BL/6J ±  kb
transcript ENSMUST00000020343 Ensembl | MGI Sequence Detail 1823 Not Applicable 
polypeptide ENSMUSP00000020343 Ensembl | MGI Sequence Detail 222 Not Applicable 

For the selected sequences
All sequences(28) RefSeq(6) UniProt(5)
Polymorphisms
SNPs within 2kb(260 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR001806 Small GTPase superfamily
InterPro IPR003579 Small GTPase superfamily, Rab type
InterPro IPR005225 Small GTP-binding protein domain
Protein Ontology PR:000013594 ras-related protein Rab-21
References
(Earliest) J:24144 Chavrier P, et al., The complexity of the Rab and Rho GTP-binding protein subfamilies revealed by a PCR cloning approach. Gene. 1992 Mar 15;112(2):261-4
(Latest) J:175792 Jelcick AS, et al., Genetic variations strongly influence phenotypic outcome in the mouse retina. PLoS One. 2011;6(7):e21858
All references(32)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory