About   Help   FAQ
F13b
Gene Detail
Symbol

Name
ID
F13b
coagulation factor XIII, beta subunit
MGI:88379
Synonyms
Cf13b, Cf-13b
Feature Type
protein coding gene
Genetic Map
Chromosome 1
61.57 cM, cytoband F
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr1:139501702-139523752 bp, + strand
From VEGA annotation of GRCm38

  22051 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:1512  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

HCOP human homology predictions: F13B
Protein SuperFamily: coagulation factor XIII chain b
Gene Tree: F13b

Human
homologs
F13B, coagulation factor XIII, B polypeptide
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 2165
neXtProt AC: NX_P05160

Human Synonyms: FXIIIB

Human Chr (Location): 1q31-q32.1; chr1:197039191-197067267 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human F13B

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(2) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a null mutation display increased bleeding time.
 
Interactions
F13b interacts with 110 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process blood coagulation, hemostasis
Component extracellular region
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (37)    Tissues (14)    Images (23)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 23
RT-PCR 14
cDNA source data(22)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase f13b    NEW 
Molecular
reagents
All nucleic(24) cDNA(22) Primer pair(2)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000021467 (Evidence)
Ensembl Gene Model ENSMUSG00000026368 (Evidence)
Entrez Gene 14060 (Evidence)
UniGene 30105
DFCI TC1584450
DoTS DT.532664
NIA Mouse Gene Index U000883
Consensus CDS Project CCDS48386.1
International Mouse Phenotyping Consortium Status F13b
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000021467 VEGA Gene Model | MGI Sequence Detail 22051 C57BL/6J ±  kb
transcript OTTMUST00000050890 VEGA | MGI Sequence Detail 2379 Not Applicable 
polypeptide OTTMUSP00000023865 VEGA | MGI Sequence Detail 669 Not Applicable 

For the selected sequences
All sequences(28) RefSeq(6) UniProt(3)
Polymorphisms
PCR(1) : SNPs within 2kb(214 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000436 Sushi/SCR/CCP domain
Protein Ontology PR:000007298 coagulation factor XIII B chain
References
(Earliest) J:4265 Nonaka M, et al., Molecular cloning of the b subunit of mouse coagulation factor XIII and assignment of the gene to chromosome 1: close evolutionary relationship to complement factor H. Genomics. 1993 Mar;15(3):535-42
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(27)
Other
accession IDs
MGD-MRK-1945, MGD-MRK-1951, MGI:1309530

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/25/2015
MGI 6.0
The Jackson Laboratory