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Calm1
Gene Detail
 Symbol
Name
ID
Calm1
calmodulin 1
MGI:88251
Feature Type protein coding gene
Genetic Map
Chromosome 12
50.43 cM
Detailed Genetic Map ± 1 cM


Mapping data(7)
Sequence Map
Chr12:100199435-100209806 bp, + strand
From VEGA annotation of GRCm38

  10372 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:116117  Vertebrate Homology Class
3 mouse; 3 rat; 1 chimpanzee; 1 rhesus macaque; 3 cattle; 3 dog; 1 chicken; 2 western clawed frog; 6 zebrafish

Gene Tree: Calm1

Mutations,
alleles, and
phenotypes
All mutations/alleles(24) : Gene trapped(22) Targeted(2)
Interactions
Calm1 interacts with 379 markers (Mir1a-1, Mir1a-2, Mir9-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (44 annotations)
Process G2/M transition of mitotic cell cycle, positive regulation of DNA binding, ...
Component cytoplasm, growth cone, ...
Function adenylate cyclase binding, calcium-dependent protein binding, ...
External Resources: FuncBase
Expression
Literature Summary: (13 records)
Data Summary: Results (142)    Tissues (127)    Images (32)
Theiler Stages: 19, 21, 22, 23, 24, 26, 27, 28
Assay TypeResults
RNA in situ 140
RT-PCR 2
cDNA source data(52)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(58) cDNA(53) Primer pair(4) Other(1)
Microarray probesets(7)
Other database
links
VEGA Gene ModelOTTMUSG00000016979 (Evidence)
Ensembl Gene ModelENSMUSG00000001175 (Evidence)
Entrez Gene12313 (Evidence)
DFCITC1573669, TC1758850
DoTSDT.101256272, DT.101361339, DT.497089, DT.87043669, DT.91312145, DT.94385653, DT.99871263
NIA Mouse Gene IndexU043305
Consensus CDS ProjectCCDS36523.1
International Mouse Knockout Project StatusCalm1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000016979 VEGA Gene Model | MGI Sequence Detail 10372 C57BL/6J ±  kb
transcript OTTMUST00000041175 VEGA | MGI Sequence Detail 3987 Not Applicable 
polypeptide OTTMUSP00000018449 VEGA | MGI Sequence Detail 197 Not Applicable 

For the selected sequences
All sequences(84) RefSeq(2)
Polymorphisms SNPs within 2kb(74 from dbSNP Build 137)
References (Earliest) J:9357 Kluxen FW, et al., Opposite regulation of the mRNAs for parvalbumin and p19/6.8 in myotonic mouse muscle. Eur J Biochem. 1988 Sep 1;176(1):153-8
(Latest) J:203925 Tian X, et al., Calmodulin modulates the termination threshold for cardiac ryanodine receptor-mediated Ca2+ release. Biochem J. 2013 Nov 1;455(3):367-75
All references(63)
Other
accession IDs
MGD-MRK-1734, MGI:2144778, MGI:2144797, MGI:2144834, MGI:2144926

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory