Calm1
Gene Detail

Symbol Name ID

Calm1 calmodulin 1 MGI:88251

Feature Type

protein coding gene

Genetic Map

Chromosome 12

50.43 cM
Detailed Genetic Map ± 1 cM


Mapping data(7)

Sequence Map

Chr12:100199435-100209806 bp, + strand From VEGA annotation of GRCm38   10372 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:116117  Vertebrate Homology Class
3 mouse; 3 rat; 1 chimpanzee; 3 cattle; 1 dog; 1 chicken

Gene Tree: Calm1

Alleles and phenotypes

All alleles(24) : Targeted(2) Gene trapped(22)

Gene Ontology (GO) classifications

All GO classifications: (44 annotations)

Process	cell cycle, G2/M transition of mitotic cell cycle, ...
Component	cytoplasm, growth cone, ...
Function	adenylate cyclase binding, calcium-dependent protein binding, ...

External Resources: FuncBase

Expression

Literature Summary: (13 records)
Data Summary: Results (142)    Tissues (127)    Images (32)
Theiler Stages: 19, 21, 22, 23, 24, 26, 28

Assay Type	Results
RNA in situ	140
RT-PCR	2

cDNA source data(52)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(58) cDNA(53) Primer pair(4) Other(1)
Microarray probesets(7)

Other database links

VEGA Gene Model	OTTMUSG00000016979 (Evidence)
Ensembl Gene Model	ENSMUSG00000001175 (Evidence)
Entrez Gene	12313 (Evidence)
DFCI	TC1573669, TC1758850
DoTS	DT.101256272, DT.101361339, DT.497089, DT.87043669, DT.91312145, DT.94385653, DT.99871263
NIA Mouse Gene Index	U043305
Consensus CDS Project	CCDS36523.1
International Mouse Knockout Project Status	Calm1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000016979	VEGA Gene Model | MGI Sequence Detail	10372	C57BL/6J
transcript	OTTMUST00000041175	VEGA | MGI Sequence Detail	3987	Not Applicable
polypeptide	OTTMUSP00000018449	VEGA | MGI Sequence Detail	197	Not Applicable

All sequences(84) RefSeq(2)

Polymorphisms

SNPs(38 from dbSNP Build 128)

References

(Earliest) J:9357 Kluxen FW, et al., Opposite regulation of the mRNAs for parvalbumin and p19/6.8 in myotonic mouse muscle. Eur J Biochem. 1988 Sep 1;176(1):153-8
(Latest) J:188062 Park JH, et al., Fibronectin stimulates migration through lipid raft dependent NHE-1 activation in mouse embryonic stem cells: Involvement of RhoA, Ca(2+)/CaM, and ERK. Biochim Biophys Acta. 2012 Oct;1820(10):1618-27
All references(62)

Other accession IDs

MGD-MRK-1734, MGI:2144778, MGI:2144797, MGI:2144834, MGI:2144926