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Apoc4
Gene Detail
 Symbol
Name
ID
Apoc4
apolipoprotein C-IV
MGI:87878
Synonyms Acl
Feature Type protein coding gene
Genetic Map
Chromosome 7
9.94 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr7:19678094-19681416 bp, - strand
From VEGA annotation of GRCm38

  3323 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:1245  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog

Protein SuperFamily: apolipoprotein C-IV
Gene Tree: Apoc4

Human
homologs
Human Homolog APOC4, apolipoprotein C-IV
NCBI Gene ID 346
neXtProt AC  NX_P55056
Human Synonyms  APO-CIV, APOC-IV
Human Chr (Location)  19q13.2; chr19:44942238-44945496 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from APF )
Interactions
Apoc4 interacts with 6 markers (Mir137, Mir324, Mir325, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process lipid transport, positive regulation of sequestering of triglyceride, ...
Component extracellular region, high-density lipoprotein particle, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (9)    Tissues (9)   
Theiler Stages: 20, 28
Assay TypeResults
Northern blot 9
cDNA source data(61)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(64) Genomic(3) cDNA(61)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000032973 (Evidence)
Ensembl Gene ModelENSMUSG00000074336 (Evidence)
Entrez Gene11425 (Evidence)
UniGene477720
DFCITC1580992, TC1668592
DoTSDT.533263, DT.91295051
Consensus CDS ProjectCCDS20910.1
International Mouse Knockout Project StatusApoc4
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000032973 VEGA Gene Model | MGI Sequence Detail 3323 C57BL/6J ±  kb
transcript OTTMUST00000082220 VEGA | MGI Sequence Detail 464 Not Applicable 
polypeptide OTTMUSP00000044048 VEGA | MGI Sequence Detail 124 Not Applicable 

For the selected sequences
All sequences(19) RefSeq(2) UniProt(1)
Polymorphisms SNPs within 2kb(71 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000004153 apolipoprotein C-IV
References (Earliest) J:18302 van Eck MM, et al., The apolipoprotein C2-linked (Acl) gene: a new gene within the mouse apolipoprotein e-c1-c2 gene cluster. Genomics. 1994 May 1;21(1):110-5
(Latest) J:150399 Kotite L, et al., Human apoC-IV: isolation, characterization, and immunochemical quantification in plasma and plasma lipoproteins. J Lipid Res. 2003 Jul;44(7):1387-94
All references(23)
Other
accession IDs
MGD-MRK-1042

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory