Gm45711 Gene Detail

Summary

• Symbol
  Gm45711
• Name
  predicted gene 45711

• Feature Type
  protein coding gene
• IDs
  MGI:5804826
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr8:105007979-105036713 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic

Strain
Comparison

• SNPs within 2kb
  95 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5804826	protein coding gene	Chr8:105007979-105036713 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0034005	protein coding gene	Chr8:106398863-106441456 (-)
A/J	MGP_AJ_G0033986	protein coding gene	Chr8:102189863-102210651 (-)
AKR/J	MGP_AKRJ_G0033912	protein coding gene	Chr8:105159167-105180454 (-)
BALB/cJ	MGP_BALBcJ_G0033979	protein coding gene	Chr8:102415963-102438384 (-)
C3H/HeJ	MGP_C3HHeJ_G0033691	protein coding gene	Chr8:105851332-105873340 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0031443	protein coding gene	Chr8:95489427-95506083 (-)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0033665	protein coding gene	Chr8:113965207-113986974 (-)
DBA/2J	MGP_DBA2J_G0033819	protein coding gene	Chr8:101557426-101574523 (-)
FVB/NJ	MGP_FVBNJ_G0033766	protein coding gene	Chr8:100490410-100509712 (-)
LP/J	MGP_LPJ_G0033910	protein coding gene	Chr8:106606098-106624196 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0033808	protein coding gene	Chr8:117157126-117182571 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0034517	protein coding gene	Chr8:105094604-105129935 (-)
PWK/PhJ	MGP_PWKPhJ_G0032721	protein coding gene	Chr8:100962343-100981090 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0032560	protein coding gene	Chr8:103936288-103950418 (-)
WSB/EiJ	MGP_WSBEiJ_G0033134	protein coding gene	Chr8:105785124-105808483 (-)

Homology

• Gene Tree
  Gm45711
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000031876 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000031876	Ensembl Gene Model | MGI Sequence Detail	28735	C57BL/6J
transcript	ENSMUST00000162616	Ensembl | MGI Sequence Detail	1660	Not Applicable
polypeptide	ENSMUSP00000124800	Ensembl | MGI Sequence Detail	391	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm45711:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr82599	Chr8:105036741-105036742 (-)	-29 bp
Tssr82598	Chr8:105036684-105036734 (-)	4 bp