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Gm45054 Gene Detail
Summary
  • Symbol
    Gm45054
  • Name
    predicted gene 45054
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5753630
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:63683994-63690574 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    96 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5753630
 lncRNA gene Chr7:63683994-63690574 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007180
 lincRNA gene Chr7:65170697-65177374 (-)
A/J MGP_AJ_G0007176
 lincRNA gene Chr7:63914071-63920619 (-)
AKR/J MGP_AKRJ_G0007146
 lincRNA gene Chr7:65271586-65278169 (-)
BALB/cJ MGP_BALBcJ_G0007155
 lincRNA gene Chr7:63652031-63658507 (-)
C3H/HeJ MGP_C3HHeJ_G0007098
 lincRNA gene Chr7:65923690-65930277 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007324
 lincRNA gene Chr7:67975464-67981982 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006534
 lincRNA gene Chr7:66864198-66870688 (-)
CAST/EiJ MGP_CASTEiJ_G0007001
 lincRNA gene Chr7:56580180-56588441 (-)
CBA/J MGP_CBAJ_G0007081
 lincRNA gene Chr7:70171873-70178460 (-)
DBA/2J MGP_DBA2J_G0007102
 lincRNA gene Chr7:62647538-62654264 (-)
FVB/NJ MGP_FVBNJ_G0007125
 lincRNA gene Chr7:62763239-62769777 (-)
LP/J MGP_LPJ_G0007184
 lincRNA gene Chr7:66395611-66402071 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007102
 lincRNA gene Chr7:70444639-70451226 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007327
 lincRNA gene Chr7:64533520-64540107 (-)
PWK/PhJ MGP_PWKPhJ_G0006943
 lincRNA gene Chr7:55656616-55663357 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006851
 lincRNA gene Chr7:51670758-51677327 (-)
WSB/EiJ MGP_WSBEiJ_G0007062
 lincRNA gene Chr7:64914258-64921659 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000108469 Ensembl Gene Model | MGI Sequence Detail 6581 C57BL/6J ±  kb
transcript ENSMUST00000206525 Ensembl | MGI Sequence Detail 342 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 7
    Diseases 1
    Phenotypes 5
  • Earliest
    J:260165 Fejgin K, et al., A mouse model that recapitulates cardinal features of the 15q13.3 microdeletion syndrome including schizophrenia- and epilepsy-related alterations. Biol Psychiatry. 2014 Jul 15;76(2):128-37
  • Latest
    J:322231 Malwade S, et al., Identification of Vulnerable Interneuron Subtypes in 15q13.3 Microdeletion Syndrome Using Single-Cell Transcriptomics. Biol Psychiatry. 2022 Apr 15;91(8):727-739
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory