Gm44997 Gene Detail

Summary

• Symbol
  Gm44997
• Name
  predicted gene 44997

• Feature Type
  lncRNA gene
• IDs
  MGI:5753573
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:42210838-42227659 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  154 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753573	lncRNA gene	Chr7:42210838-42227659 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0015640	unclassified non-coding RNA gene	Chr7:41546284-41651625 (-)
AKR/J	MGP_AKRJ_G0015603	unclassified non-coding RNA gene	Chr7:42698844-42716682 (-)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0015423	unclassified non-coding RNA gene	Chr7:43388835-43405922 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0016055	unclassified non-coding RNA gene	Chr7:44548562-44582172 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0015404	unclassified non-coding RNA gene	Chr7:45932269-45979481 (-)
DBA/2J	MGP_DBA2J_G0015499	unclassified non-coding RNA gene	Chr7:41370250-41415130 (-)
FVB/NJ	MGP_FVBNJ_G0015506	unclassified non-coding RNA gene	Chr7:41106776-41124597 (-)
LP/J	MGP_LPJ_G0015579	unclassified non-coding RNA gene	Chr7:43032070-43081393 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015528	unclassified non-coding RNA gene	Chr7:44913529-44934320 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016097	unclassified non-coding RNA gene	Chr7:41976553-41996299 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm44997
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14

• Ensembl
  ENSMUSG00000108446 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108446	Ensembl Gene Model | MGI Sequence Detail	16822	C57BL/6J
transcript	ENSMUST00000205775	Ensembl | MGI Sequence Detail	3535	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;