Gm44981 Gene Detail

Summary

• Symbol
  Gm44981
• Name
  predicted gene 44981

• Feature Type
  lncRNA gene
• IDs
  MGI:5753557
  NCBI Gene: 115490423
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:91688317-91690259 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic

Strain
Comparison

• SNPs within 2kb
  21 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753557	lncRNA gene	Chr6:91688317-91690259 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0002020	unclassified gene	Chr6:93320671-93322613 (-)
A/J	MGP_AJ_G0001996	unclassified gene	Chr6:89765853-89767795 (-)
AKR/J	MGP_AKRJ_G0001984	unclassified gene	Chr6:92253873-92255815 (-)
BALB/cJ	MGP_BALBcJ_G0001993	unclassified gene	Chr6:89710157-89712099 (-)
C3H/HeJ	MGP_C3HHeJ_G0001932	unclassified gene	Chr6:92180498-92182440 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002115	unclassified gene	Chr6:95740481-95742423 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0001937	unclassified gene	Chr6:92377777-92379719 (-)
CBA/J	MGP_CBAJ_G0001964	unclassified gene	Chr6:99306384-99308326 (-)
DBA/2J	MGP_DBA2J_G0001968	unclassified gene	Chr6:88948125-88950067 (-)
FVB/NJ	MGP_FVBNJ_G0001976	unclassified gene	Chr6:88161942-88163884 (-)
LP/J	MGP_LPJ_G0002022	unclassified gene	Chr6:93284878-93286820 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001953	unclassified gene	Chr6:103358826-103360768 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002105	unclassified gene	Chr6:92102114-92104056 (-)
PWK/PhJ	MGP_PWKPhJ_G0001901	unclassified gene	Chr6:87903154-87905100 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001862	unclassified gene	Chr6:91009477-91011409 (-)
WSB/EiJ	MGP_WSBEiJ_G0001963	unclassified gene	Chr6:92574831-92576773 (-)

Homology

• Gene Tree
  Gm44981
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  17
• Gene trapped
  17
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000108574 (Evidence)
• NCBI Gene
  115490423

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108574	Ensembl Gene Model | MGI Sequence Detail	1943	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;