Gm44964 Pseudogene Detail

Summary

• Symbol
  Gm44964
• Name
  predicted gene 44964

• Feature Type
  pseudogene
• IDs
  MGI:5753540
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:25991803-25992296 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  7 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753540	pseudogene	Chr7:25991803-25992296 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013851	pseudogene	Chr7:25401408-25403118 (+)
A/J	MGP_AJ_G0013851	pseudogene	Chr7:24791216-24829858 (+)
AKR/J	MGP_AKRJ_G0013799	pseudogene	Chr7:25415809-25417512 (+)
BALB/cJ	MGP_BALBcJ_G0013831	pseudogene	Chr7:24990380-24994248 (+)
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0012132	pseudogene	Chr7:26079212-26080913 (+)
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0013713	pseudogene	Chr7:24612608-24615114 (+)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0013792	pseudogene	Chr7:25676161-25677871 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013728	pseudogene	Chr7:26939357-26941260 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014208	pseudogene	Chr7:24451550-24452058 (+)
PWK/PhJ	MGP_PWKPhJ_G0013142	pseudogene	Chr7:19564214-19573778 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012916	pseudogene	Chr7:16121614-16123325 (+)
WSB/EiJ	MGP_WSBEiJ_G0013391	pseudogene	Chr7:25275863-25296912 (+)

Homology

• Gene Tree
  Gm44964
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00000108698 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108698	Ensembl Gene Model | MGI Sequence Detail	494	C57BL/6J
transcript	ENSMUST00000207011	Ensembl | MGI Sequence Detail	376	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;