Gm44958 Pseudogene Detail

Summary

• Symbol
  Gm44958
• Name
  predicted gene 44958

• Feature Type
  pseudogene
• IDs
  MGI:5753534
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:131268566-131269301 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic

Strain
Comparison

• SNPs within 2kb
  44 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753534	pseudogene	Chr6:131268566-131269301 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013731	pseudogene	Chr6:135221850-135222585 (-)
A/J	MGP_AJ_G0013721	pseudogene	Chr6:129969269-129970005 (-)
AKR/J	MGP_AKRJ_G0013677	pseudogene	Chr6:133756543-133757279 (-)
BALB/cJ	MGP_BALBcJ_G0013702	pseudogene	Chr6:129641610-129642346 (-)
C3H/HeJ	MGP_C3HHeJ_G0013537	pseudogene	Chr6:133843384-133844120 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014094	pseudogene	Chr6:138840255-138840990 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012059	pseudogene	Chr6:128261836-128262602 (-)
CAST/EiJ	MGP_CASTEiJ_G0013222	pseudogene	Chr6:133755837-133756569 (-)
CBA/J	MGP_CBAJ_G0013508	pseudogene	Chr6:144167400-144168136 (-)
DBA/2J	MGP_DBA2J_G0013592	pseudogene	Chr6:128878081-128878817 (-)
FVB/NJ	MGP_FVBNJ_G0013588	pseudogene	Chr6:127780040-127780775 (-)
LP/J	MGP_LPJ_G0013672	pseudogene	Chr6:135534095-135534831 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013601	pseudogene	Chr6:147948657-147951196 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014076	pseudogene	Chr6:133627118-133627852 (-)
PWK/PhJ	MGP_PWKPhJ_G0013028	pseudogene	Chr6:127271496-127272233 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012807	pseudogene	Chr6:131880613-131881347 (-)
WSB/EiJ	MGP_WSBEiJ_G0013276	pseudogene	Chr6:134200163-134200898 (-)

Homology

• Gene Tree
  Gm44958
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000107658 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107658	Ensembl Gene Model | MGI Sequence Detail	736	C57BL/6J
transcript	ENSMUST00000203734	Ensembl | MGI Sequence Detail	736	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;